RNA–Protein interactions for RNA: ENST00000425141.5

SLC4A3-207, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best)

Gene SLC4A3, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-207ENST00000425141 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
SLC4A3-207ENST00000425141 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 ABCC4O15439 1325 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 GRM8O00222 908 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 STARD3NLO95772 234 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 CAGE1Q8TC20 777 aa13.14□□□□□ -0.31
SLC4A3-207ENST00000425141 ERBB3P21860 1342 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 VGLL3A8MV65 326 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 NOL7Q9UMY1 257 aaKnown RBP13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 A0A1B0GVL5 298 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 TYRO3Q06418 890 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 LRMPQ12912 555 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 UBAP1LF5GYI3 381 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 PTH1RQ03431 593 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 TFCP2Q12800 502 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 SNX14Q9Y5W7 946 aa13.13□□□□□ -0.31
SLC4A3-207ENST00000425141 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 LDHAL6AQ6ZMR3 332 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 UBXN4Q92575 508 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 ACSBG1Q96GR2 724 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 FAM170AA1A519 330 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 SKILP12757 684 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
SLC4A3-207ENST00000425141 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 TERF1P54274 439 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 ANKRD20A12PQ8NF67 263 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 ZKSCAN3Q9BRR0 538 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 ZNF213O14771 459 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
SLC4A3-207ENST00000425141 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 KRT32Q14532 448 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 AXDND1Q5T1B0 1012 aaPredicted RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 MYOM1P52179 1685 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 PHKG2P15735 406 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 IKQ13123 557 aaPredicted RBP13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 SLFNL1Q499Z3 407 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 NAPBQ9H115 298 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
SLC4A3-207ENST00000425141 GTF2F1P35269 517 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 AFMP43652 599 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 STX17P56962 302 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 LIG1P18858 919 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
SLC4A3-207ENST00000425141 A1BGP04217 495 aa13.08□□□□□ -0.31
SLC4A3-207ENST00000425141 ANO10Q9NW15 660 aa13.08□□□□□ -0.31
SLC4A3-207ENST00000425141 DNAI1Q9UI46 699 aa13.08□□□□□ -0.31
SLC4A3-207ENST00000425141 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
SLC4A3-207ENST00000425141 MCM5P33992 734 aa13.08□□□□□ -0.32
SLC4A3-207ENST00000425141 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
SLC4A3-207ENST00000425141 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
SLC4A3-207ENST00000425141 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
SLC4A3-207ENST00000425141 CCDC102AQ96A19 550 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms