RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PALM3A6NDB9 673 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 TTC36A6NLP5 189 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 KIAA1324LA8MWY0 1029 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 KCNQ4P56696 695 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 SPEM2Q0P670 501 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 CRTC2Q53ET0 693 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 AXDND1Q5T1B0 1012 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 KANK4Q5T7N3 995 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 LARGE2Q8N3Y3 721 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 SDR16C5Q8N3Y7 309 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 GAS2L2Q8NHY3 880 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 MORC4Q8TE76 937 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 SREK1Q8WXA9 508 aaKnown RBP4.77□□□□□ -1.65
SF3B1-203ENST00000414174 MTA3Q9BTC8 594 aa4.77□□□□□ -1.65
SF3B1-203ENST00000414174 ACIN1Q9UKV3 1341 aaKnown RBP4.76□□□□□ -1.65
SF3B1-203ENST00000414174 RBM47A0AV96 593 aaKnown RBP4.76□□□□□ -1.65
SF3B1-203ENST00000414174 M0R2N6 131 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 LGR5O75473 907 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 TCF3P15923 654 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 FSTP19883 344 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 CALRP27797 417 aaKnown RBP4.76□□□□□ -1.65
SF3B1-203ENST00000414174 NOS3P29474 1203 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 IREB2P48200 963 aaKnown RBP4.76□□□□□ -1.65
SF3B1-203ENST00000414174 HIRAP54198 1017 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-203ENST00000414174 LONRF3Q496Y0 759 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 LRRC69Q6ZNQ3 347 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 C8orf37Q96NL8 207 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 PPP1R12CQ9BZL4 782 aa4.76□□□□□ -1.65
SF3B1-203ENST00000414174 SERTM1A2A2V5 107 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 ATP1A2P50993 1020 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 AFF1P51825 1210 aaKnown RBP4.75□□□□□ -1.65
SF3B1-203ENST00000414174 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
SF3B1-203ENST00000414174 JAG1P78504 1218 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 PTK7Q13308 1070 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 CNGB1Q14028 1251 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-203ENST00000414174 CFAP70Q5T0N1 1121 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 CCDC181Q5TID7 509 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 IGF2-ASQ6U949 168 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 FBXO11Q86XK2 927 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 DMRTC2Q8IXT2 367 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-203ENST00000414174 ZNF280CQ8ND82 737 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 HSH2DQ96JZ2 352 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 EFCC1Q9HA90 598 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 NEUROD4Q9HD90 331 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 MAGEC2Q9UBF1 373 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-203ENST00000414174 RPS6KL1Q9Y6S9 549 aa4.75□□□□□ -1.65
SF3B1-203ENST00000414174 EXOC5O00471 708 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 PPFIA4O75335 1185 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 MED26O95402 600 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 RASA1P20936 1047 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 CASC1Q6TDU7 716 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 KRBA2Q6ZNG9 492 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 SMC5Q8IY18 1101 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 DZIP1LQ8IYY4 767 aaKnown RBP4.74□□□□□ -1.65
SF3B1-203ENST00000414174 CACTIN-AS1Q8N1I8 211 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 CEP120Q8N960 986 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 CCER1Q8TC90 406 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-203ENST00000414174 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 PHACTR1Q9C0D0 580 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 JPH1Q9HDC5 661 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-203ENST00000414174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.74□□□□□ -1.658e-7■■■■■ 27.9
SF3B1-203ENST00000414174 ZNF232Q9UNY5 417 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 HCN4Q9Y3Q4 1203 aa4.74□□□□□ -1.65
SF3B1-203ENST00000414174 RAB11FIP3O75154 756 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 LIG1P18858 919 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 ARID4AP29374 1257 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 TYRO3Q06418 890 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 DPYDQ12882 1025 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 CCDC96Q2M329 555 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 RHPN1Q8TCX5 695 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 UBXN4Q92575 508 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 MEGF10Q96KG7 1140 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 CALR3Q96L12 384 aaKnown RBP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 C2orf49Q9BVC5 232 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 KIAA1522Q9P206 1035 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 ZNF777Q9ULD5 760 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-203ENST00000414174 SLC6A14Q9UN76 642 aa4.73□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L15C9J2P7 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L10C9JJH3 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L13C9JLJ4 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L12C9JPN9 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L11C9JVI0 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L21D6R901 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L18D6R9N7 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L22D6RA61 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L17D6RBQ6 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L19D6RCP7 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L20D6RJB6 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 CCER2I3L3R5 266 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 GSC2O15499 205 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 ANP32CO43423 234 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 NRDCO43847 1150 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 PPP1R12BO60237 982 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-203ENST00000414174 PPP1R15AO75807 674 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-203ENST00000414174 GRNP28799 593 aaKnown RBP4.72□□□□□ -1.65
SF3B1-203ENST00000414174 SEC13P55735 322 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 USP17L24Q0WX57 530 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 FOXD4Q12950 439 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 343.6 ms