RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
SCFD2-202ENST00000401642 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
SCFD2-202ENST00000401642 HELBQ8NG08 1087 aaPredicted RBP13.12□□□□□ -0.31
SCFD2-202ENST00000401642 AP5Z1O43299 807 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
SCFD2-202ENST00000401642 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 ZNF609O15014 1411 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 UTYO14607 1347 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 APPP05067 770 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 FOXO4P98177 505 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 LRP10Q7Z4F1 713 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
SCFD2-202ENST00000401642 NR1I2O75469 434 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 SCRN1Q12765 414 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 RGPD5Q99666 1765 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 SNAP23O00161 211 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 RXRAP19793 462 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 PDCP20941 246 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 MAP3K11Q16584 847 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 HAUS7Q99871 368 aa13.1□□□□□ -0.31
SCFD2-202ENST00000401642 CCDC192P0DO97 292 aa13.09□□□□□ -0.31
SCFD2-202ENST00000401642 SCARF1Q14162 830 aa13.09□□□□□ -0.31
SCFD2-202ENST00000401642 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
SCFD2-202ENST00000401642 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
SCFD2-202ENST00000401642 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
SCFD2-202ENST00000401642 POLR3DP05423 398 aaPredicted RBP13.09□□□□□ -0.31
SCFD2-202ENST00000401642 DNAJC25Q9H1X3 360 aa13.09□□□□□ -0.31
SCFD2-202ENST00000401642 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
SCFD2-202ENST00000401642 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
SCFD2-202ENST00000401642 MED23Q9ULK4 1368 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 M0R2C6 588 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 TYRO3Q06418 890 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 EYA2O00167 538 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
SCFD2-202ENST00000401642 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 TRIM5Q9C035 493 aa13.08□□□□□ -0.32
SCFD2-202ENST00000401642 IDH1O75874 414 aaKnown RBP13.07□□□□□ -0.32
SCFD2-202ENST00000401642 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 ZAP70P43403 619 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 ME1P48163 572 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 KRT32Q14532 448 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
SCFD2-202ENST00000401642 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-202ENST00000401642 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 E7EWF7 191 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 H7C1W4 665 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 IL2RBP14784 551 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 CASP7P55210 303 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-202ENST00000401642 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 SASS6Q6UVJ0 657 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 MAST3O60307 1309 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-202ENST00000401642 HLFQ16534 295 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-202ENST00000401642 IL17RAQ96F46 866 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 NRBP1Q9UHY1 535 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 KDM3BQ7LBC6 1761 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 PTGS1P23219 599 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 DHX32Q7L7V1 743 aaKnown RBP13.06□□□□□ -0.32
SCFD2-202ENST00000401642 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
SCFD2-202ENST00000401642 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-202ENST00000401642 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
SCFD2-202ENST00000401642 LRMPQ12912 555 aa13.05□□□□□ -0.32
SCFD2-202ENST00000401642 KCNB2Q92953 911 aa13.05□□□□□ -0.32
SCFD2-202ENST00000401642 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
SCFD2-202ENST00000401642 PYCARDQ9ULZ3 195 aa13.05□□□□□ -0.32
SCFD2-202ENST00000401642 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
SCFD2-202ENST00000401642 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
SCFD2-202ENST00000401642 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
SCFD2-202ENST00000401642 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 ZNF500O60304 480 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 NOLC1Q14978 699 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms