RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 MCM10Q7L590 875 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 USP48Q86UV5 1035 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 TBC1D31Q96DN5 1066 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 TPCN1Q9ULQ1 816 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 PDZRN3Q9UPQ7 1066 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 CD2APQ9Y5K6 639 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 PSMA7O14818 248 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 RAPGEF3O95398 923 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 PSMC4P43686 418 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 CCDC6Q16204 474 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 EP400NLQ6ZTU2 488 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 TRMT1LQ7Z2T5 733 aaKnown RBP4.53□□□□□ -1.69
UBR3-202ENST00000392632 SRGAP1Q7Z6B7 1085 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 DAAM2Q86T65 1068 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 CCDC144CPQ8IYA2 1237 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 IFT74Q96LB3 600 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 CCDC114Q96M63 670 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 CTAGE1Q96RT6 745 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 ZBTB3Q9H5J0 574 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 ECHDC1Q9NTX5 307 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 DDX19AQ9NUU7 478 aaKnown RBP4.53□□□□□ -1.69
UBR3-202ENST00000392632 STIM2Q9P246 746 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 ADAMTS8Q9UP79 889 aa4.53□□□□□ -1.69
UBR3-202ENST00000392632 PLCB3Q01970 1234 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 INF2Q27J81 1249 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 ERCC6LQ2NKX8 1250 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 CHD1LQ86WJ1 897 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 KIF18AQ8NI77 898 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 RNF34Q969K3 372 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 BOLA2Q9H3K6 86 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 EXOC7Q9UPT5 735 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBR3-202ENST00000392632 USP16Q9Y5T5 823 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 CSADQ9Y600 493 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 PFDN6O15212 129 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 NOL3O60936 208 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 CYP7A1P22680 504 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 MCM5P33992 734 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 TPD52P55327 224 aaPredicted RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 IRX3P78415 501 aaPredicted RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 WDR44Q5JSH3 913 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 TRAPPC3LQ5T215 181 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 SMCR8Q8TEV9 937 aaPredicted RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 RRP36Q96EU6 259 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 TRIM47Q96LD4 638 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 AZI2Q9H6S1 392 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 PFDN4Q9NQP4 134 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 FAM8A1Q9UBU6 413 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 NSFL1CQ9UNZ2 370 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 GJA3Q9Y6H8 435 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBR3-202ENST00000392632 ALDH1L2Q3SY69 923 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 SPC24Q8NBT2 197 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 CPLX3Q8WVH0 158 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 PUS7Q96PZ0 661 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 FNBP1Q96RU3 617 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 ZNF408Q9H9D4 720 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 FAM184BQ9ULE4 1060 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 MRVI1Q9Y6F6 885 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 ARHGEF37A1IGU5 675 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 H0YIN7 160 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 ZBED4O75132 1171 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 CRCPO75575 148 aa4.52□□□□□ -1.69
UBR3-202ENST00000392632 METAP2P50579 478 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBR3-202ENST00000392632 IFIT1BQ5T764 474 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 RNF187Q5TA31 235 aaPredicted RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 RIOK1Q9BRS2 568 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 MAK16Q9BXY0 300 aaKnown RBP4.52□□□□□ -1.69
UBR3-202ENST00000392632 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
UBR3-202ENST00000392632 NCOA2Q15596 1464 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 GOLGA8CPA6NN73 597 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 BCAR3O75815 825 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 XRCC6P12956 609 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBR3-202ENST00000392632 KRT10P13645 584 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 TNNT1P13805 278 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 NAPAP54920 295 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 TUBB4BP68371 445 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 PLCB4Q15147 1175 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 DCAF15Q66K64 600 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 KIFAP3Q92845 792 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 KIFC2Q96AC6 838 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ZSCAN16Q9H4T2 348 aaPredicted RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 PTPRCP08575 1304 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 EEF2P13639 858 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 IL15P40933 162 aaPredicted RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 MXRA7P84157 204 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ARID5AQ03989 594 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 RRS1Q15050 365 aaKnown RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 PTPN14Q15678 1187 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 PARP10Q53GL7 1025 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 RILPL1Q5EBL4 403 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 TTLL7Q6ZT98 887 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ANKRD13DQ6ZTN6 518 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 LARGE2Q8N3Y3 721 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 PPFIBP2Q8ND30 876 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 ZNF830Q96NB3 372 aaPredicted RBP4.51□□□□□ -1.69
UBR3-202ENST00000392632 FAM204AQ9H8W3 233 aa4.51□□□□□ -1.69
UBR3-202ENST00000392632 AS3MTQ9HBK9 375 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms