RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
SFR1-201ENST00000369727 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 APBB1O00213 710 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
SFR1-201ENST00000369727 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
SFR1-201ENST00000369727 NME9Q86XW9 330 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 ZSCAN1Q8NBB4 408 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 RNF217Q8TC41 542 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 RGPD5Q99666 1765 aa10.41□□□□□ -0.74
SFR1-201ENST00000369727 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.74
SFR1-201ENST00000369727 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.75
SFR1-201ENST00000369727 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.75
SFR1-201ENST00000369727 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.75
SFR1-201ENST00000369727 PARP4Q9UKK3 1724 aaKnown RBP10.4□□□□□ -0.75
SFR1-201ENST00000369727 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.75
SFR1-201ENST00000369727 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
SFR1-201ENST00000369727 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
SFR1-201ENST00000369727 SLC35F4A4IF30 521 aa10.39□□□□□ -0.75
SFR1-201ENST00000369727 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
SFR1-201ENST00000369727 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
SFR1-201ENST00000369727 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
SFR1-201ENST00000369727 LTN1O94822 1766 aa10.38□□□□□ -0.75
SFR1-201ENST00000369727 PDE3BQ13370 1112 aa10.38□□□□□ -0.75
SFR1-201ENST00000369727 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
SFR1-201ENST00000369727 TOM1L2Q6ZVM7 507 aa10.38□□□□□ -0.75
SFR1-201ENST00000369727 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 BAG6P46379 1132 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 FAM182BQ5T319 152 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 DEFB132Q7Z7B7 95 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
SFR1-201ENST00000369727 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 CDCA7Q9BWT1 371 aaPredicted RBP10.37□□□□□ -0.75
SFR1-201ENST00000369727 CARD10Q9BWT7 1032 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
SFR1-201ENST00000369727 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
SFR1-201ENST00000369727 CSB-PGBD3P0DP91 1061 aa10.36□□□□□ -0.75
SFR1-201ENST00000369727 ERVK-9P63128 1117 aa10.36□□□□□ -0.75
SFR1-201ENST00000369727 COG3Q96JB2 828 aa10.36□□□□□ -0.75
SFR1-201ENST00000369727 DISP2A7MBM2 1401 aa10.36□□□□□ -0.75
SFR1-201ENST00000369727 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
SFR1-201ENST00000369727 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
SFR1-201ENST00000369727 CC2D2BQ6DHV5 1058 aa10.35□□□□□ -0.75
SFR1-201ENST00000369727 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
SFR1-201ENST00000369727 LRRC37A3O60309 1634 aa10.35□□□□□ -0.75
SFR1-201ENST00000369727 MYOM1P52179 1685 aa10.35□□□□□ -0.75
SFR1-201ENST00000369727 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
SFR1-201ENST00000369727 SCTRP47872 440 aa10.34□□□□□ -0.75
SFR1-201ENST00000369727 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
SFR1-201ENST00000369727 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 FYB1O15117 783 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 ITGA6P23229 1130 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 DDB1Q16531 1140 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 IP6K1Q92551 441 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 KIF20BQ96Q89 1820 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 OVOS2A0A0G2JMS6 1433 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 MEN1O00255 615 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 TRIM37O94972 964 aa10.33□□□□□ -0.76
SFR1-201ENST00000369727 RNF144AP50876 292 aaPredicted RBP10.33□□□□□ -0.76
SFR1-201ENST00000369727 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
SFR1-201ENST00000369727 FAM208AQ9UK61 1670 aaKnown RBP10.33□□□□□ -0.76
SFR1-201ENST00000369727 PARD3Q8TEW0 1356 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 A0A1W2PRU2 124 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 KRT76Q01546 638 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 PRICKLE2Q7Z3G6 844 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 VWA5B2Q8N398 1253 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 ANKRD24Q8TF21 1146 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 NLRP2Q9NX02 1062 aa10.32□□□□□ -0.76
SFR1-201ENST00000369727 MAP3K19Q56UN5 1328 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 SBF2Q86WG5 1849 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 BCL9O00512 1426 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 EXOC5O00471 708 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 APBA3O96018 575 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 HSPA5P11021 654 aaKnown RBP10.31□□□□□ -0.76
SFR1-201ENST00000369727 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
SFR1-201ENST00000369727 RTL1A6NKG5 1358 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 CDC14CA4D256 554 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 HOXC9P31274 260 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 AMPHP49418 695 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 IRF5Q13568 498 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 CYP2U1Q7Z449 544 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 CAMKK2Q96RR4 588 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
SFR1-201ENST00000369727 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 OSBPL3Q9H4L5 887 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 TNS2Q63HR2 1409 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 NSD3Q9BZ95 1437 aa10.3□□□□□ -0.76
SFR1-201ENST00000369727 IL2RBP14784 551 aa10.29□□□□□ -0.76
SFR1-201ENST00000369727 RHOQP17081 205 aa10.29□□□□□ -0.76
SFR1-201ENST00000369727 MARCH10Q8NA82 808 aaPredicted RBP10.29□□□□□ -0.76
SFR1-201ENST00000369727 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
SFR1-201ENST00000369727 EZH2Q15910 746 aaKnown RBP10.28□□□□□ -0.76
SFR1-201ENST00000369727 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
SFR1-201ENST00000369727 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms