RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ADD1P35611 737 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 LARP1BQ659C4 914 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 ILDR1Q86SU0 546 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 ERCC4Q92889 916 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 LAMB4A4D0S4 1761 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 ZNF500O60304 480 aaPredicted RBP7.21□□□□□ -1.25
CLCN3-201ENST00000347613 ADCY5O95622 1261 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 DDX58O95786 925 aaKnown RBP7.21□□□□□ -1.25
CLCN3-201ENST00000347613 ERC1Q8IUD2 1116 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 CKAP2LQ8IYA6 745 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 FMNL2Q96PY5 1086 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 SLC4A9Q96Q91 983 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 HAUS7Q99871 368 aa7.21□□□□□ -1.25
CLCN3-201ENST00000347613 NR1I2O75469 434 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 KCNJ4P48050 445 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 UBE2HP62256 183 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 RAB11FIP4Q86YS3 637 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 NEUROD6Q96NK8 337 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-201ENST00000347613 SLIT2O94813 1529 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 COL4A1P02462 1669 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 SNAP23O00161 211 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 ATF3P18847 181 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 CEBPZQ03701 1054 aaKnown RBP7.21□□□□□ -1.26
CLCN3-201ENST00000347613 APOBRQ0VD83 1088 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 PLBD2Q8NHP8 589 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 ASAP1Q9ULH1 1129 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 TNS3Q68CZ2 1445 aa7.21□□□□□ -1.26
CLCN3-201ENST00000347613 CCT2P78371 535 aaKnown RBP7.2□□□□□ -1.26
CLCN3-201ENST00000347613 NEXNQ0ZGT2 675 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 HLFQ16534 295 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 CCDC183Q5T5S1 534 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 TTC5Q8N0Z6 440 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 RUFY2Q8WXA3 655 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 BRF1Q92994 677 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 OSBP2Q969R2 916 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 INCENPQ9NQS7 918 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 PAPPAQ13219 1627 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 MYH15Q9Y2K3 1946 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 OTUD7BQ6GQQ9 843 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 LUZP1Q86V48 1076 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 FAM89AQ96GI7 184 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 NRBP1Q9UHY1 535 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 MRVI1Q9Y6F6 885 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 UBE2Q2LH0YL09 131 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 PYCARDQ9ULZ3 195 aa7.2□□□□□ -1.26
CLCN3-201ENST00000347613 FDPSP14324 419 aaKnown RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 GUCY1B3Q02153 619 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 RESTQ13127 1097 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 GTF3C6Q969F1 213 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 NEK1Q96PY6 1258 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 GOLPH3LQ9H4A5 285 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 STRN4Q9NRL3 753 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.19□□□□□ -1.261e-6■■■□□ 15.4
CLCN3-201ENST00000347613 ZNF330Q9Y3S2 320 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 MAST3O60307 1309 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 AKAP11Q9UKA4 1901 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 COL5A2P05997 1499 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 WTIPA6NIX2 430 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 HSPD1P10809 573 aaKnown RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 ZKSCAN1P17029 563 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 LEO1Q8WVC0 666 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 GPATCH3Q96I76 525 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 SENP2Q9HC62 589 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 DACT1Q9NYF0 836 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 TACC3Q9Y6A5 838 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 KAT6BQ8WYB5 2073 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 A0A1B0GUL7 405 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 KDM4AO75164 1064 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 MSNP26038 577 aaKnown RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 HAND2P61296 217 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 MCMDC2Q4G0Z9 681 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 TOM1L2Q6ZVM7 507 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 KBTBD3Q8NAB2 608 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 SPC24Q8NBT2 197 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 NBPF3Q9H094 633 aa7.19□□□□□ -1.26
CLCN3-201ENST00000347613 PUS7LQ9H0K6 701 aaKnown RBP7.19□□□□□ -1.26
CLCN3-201ENST00000347613 ZCRB1Q8TBF4 217 aaKnown RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 SH2B1Q9NRF2 756 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 PAG1Q9NWQ8 432 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 ABCA3Q99758 1704 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 PARP4Q9UKK3 1724 aaKnown RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 SRCAPQ6ZRS2 3230 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 E7EWF7 191 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 SMIM22K7EJ46 135 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 NSUN7Q8NE18 718 aaKnown RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 ARID5BQ14865 1188 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 HS1BP3Q53T59 392 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 DNAJC10Q8IXB1 793 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 WDR17Q8IZU2 1322 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 PIGBQ92521 554 aa7.18□□□□□ -1.26
CLCN3-201ENST00000347613 ZSCAN31Q96LW9 406 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 ALDH8A1Q9H2A2 487 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-201ENST00000347613 CPDO75976 1380 aa7.17□□□□□ -1.26
CLCN3-201ENST00000347613 ZNF335Q9H4Z2 1342 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-201ENST00000347613 LRMPQ12912 555 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms