RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 GTF3C6Q969F1 213 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 ZNF594Q96JF6 807 aaPredicted RBP8.62□□□□□ -1.03
PTPRR-202ENST00000342084 NEUROD6Q96NK8 337 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 PDCL3Q9H2J4 239 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 ARFGEF2Q9Y6D5 1785 aa8.62□□□□□ -1.03
PTPRR-202ENST00000342084 GOLGA6L4A6NEF3 574 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 PDCP20941 246 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 PTGS1P23219 599 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 TIMM10P62072 90 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 SCRN1Q12765 414 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 RESTQ13127 1097 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 TTLL7Q6ZT98 887 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 BICD2Q8TD16 824 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 TNMDQ9H2S6 317 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NAP1L2Q9ULW6 460 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 CASP7P55210 303 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 CABP4P57796 275 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 CCT2P78371 535 aaKnown RBP8.61□□□□□ -1.03
PTPRR-202ENST00000342084 FGD1P98174 961 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 GUCY1B3Q02153 619 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 APOBRQ0VD83 1088 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 RABL6Q3YEC7 729 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NBPF15Q8N660 670 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 HAUS7Q99871 368 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 CBX8Q9HC52 389 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
PTPRR-202ENST00000342084 HMG20BQ9P0W2 317 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 STRCP1A6NGW2 1772 aa8.61□□□□□ -1.03
PTPRR-202ENST00000342084 H3BQV1 296 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 FOXO4P98177 505 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 TSGA10IPQ3SY00 556 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 MCMDC2Q4G0Z9 681 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 GLIPR1L2Q4G1C9 344 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 LRRC24Q50LG9 513 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 HSP90AB3PQ58FF7 597 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 NRBP1Q9UHY1 535 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 GLI3P10071 1580 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 ELP1O95163 1332 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 DCCP43146 1447 aa8.6□□□□□ -1.03
PTPRR-202ENST00000342084 DYNC1I1O14576 645 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 CTDNEP1O95476 244 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 A1BGP04217 495 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 LRMPQ12912 555 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-202ENST00000342084 PUS3Q9BZE2 481 aaKnown RBP8.59□□□□□ -1.03
PTPRR-202ENST00000342084 ALDH8A1Q9H2A2 487 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-202ENST00000342084 CLSTN2Q9H4D0 955 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 GPHNQ9NQX3 736 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-202ENST00000342084 U3KPZ7 1027 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-202ENST00000342084 KRT32Q14532 448 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 RAB11FIP4Q86YS3 637 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 MYRIPQ8NFW9 859 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 PLBD2Q8NHP8 589 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 PAG1Q9NWQ8 432 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 ABCC6O95255 1503 aa8.59□□□□□ -1.03
PTPRR-202ENST00000342084 COL18A1P39060 1754 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 M0R2C6 588 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 MYCNP04198 464 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 DRC7Q8IY82 874 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 ZNF710Q8N1W2 664 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 NSUN7Q8NE18 718 aaKnown RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 KIAA1524Q8TCG1 905 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 ERCC4Q92889 916 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 FBXW7Q969H0 707 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 SCAND2PQ9GZW5 306 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 GOLPH3LQ9H4A5 285 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 C19orf44Q9H6X5 657 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 SPTLC3Q9NUV7 552 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 LAMA4Q16363 1823 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 C11orf57Q6ZUT1 292 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-202ENST00000342084 CCDC186Q7Z3E2 898 aa8.58□□□□□ -1.04
PTPRR-202ENST00000342084 MAST3O60307 1309 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 E7EWF7 191 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 H7C1W4 665 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 ATF3P18847 181 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 ADORA1P30542 326 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
PTPRR-202ENST00000342084 ZNF75DP51815 510 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 HAND2P61296 217 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 SMARCC2Q8TAQ2 1214 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 TRIM5Q9C035 493 aa8.57□□□□□ -1.04
PTPRR-202ENST00000342084 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms