RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ZRSR1Q15695 479 aaKnown RBP16.94■□□□□ 0.3
CPSF7-201ENST00000340437 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
CPSF7-201ENST00000340437 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-201ENST00000340437 SDF4Q9BRK5 362 aa16.94■□□□□ 0.3
CPSF7-201ENST00000340437 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
CPSF7-201ENST00000340437 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-201ENST00000340437 GTF3C6Q969F1 213 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 PDIA6Q15084 440 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
CPSF7-201ENST00000340437 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-201ENST00000340437 SPTLC3Q9NUV7 552 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 FAM208AQ9UK61 1670 aaKnown RBP16.93■□□□□ 0.3
CPSF7-201ENST00000340437 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 ZSCAN25Q6NSZ9 544 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 PXDNQ92626 1479 aa16.93■□□□□ 0.3
CPSF7-201ENST00000340437 TPM3P06753 285 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 KINO60870 393 aaKnown RBP16.92■□□□□ 0.3
CPSF7-201ENST00000340437 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
CPSF7-201ENST00000340437 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
CPSF7-201ENST00000340437 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 KRT32Q14532 448 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 FSIP1Q8NA03 581 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-201ENST00000340437 CFAP45Q9UL16 551 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 USP28Q96RU2 1077 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 ANKLE2Q86XL3 938 aa16.91■□□□□ 0.3
CPSF7-201ENST00000340437 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 GJB4Q9NTQ9 266 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-201ENST00000340437 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-201ENST00000340437 RESTQ13127 1097 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 KCNB2Q92953 911 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 CCDC112Q8NEF3 446 aa16.9■□□□□ 0.3
CPSF7-201ENST00000340437 COL15A1P39059 1388 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 GOLPH3LQ9H4A5 285 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 USP27XA6NNY8 438 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 ATP5JP18859 108 aa16.89■□□□□ 0.29
CPSF7-201ENST00000340437 CABP4P57796 275 aa16.88■□□□□ 0.29
CPSF7-201ENST00000340437 ELP1O95163 1332 aa16.88■□□□□ 0.29
CPSF7-201ENST00000340437 SMC2O95347 1197 aa16.88■□□□□ 0.29
CPSF7-201ENST00000340437 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
CPSF7-201ENST00000340437 NALCNQ8IZF0 1738 aa16.88■□□□□ 0.29
CPSF7-201ENST00000340437 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
CPSF7-201ENST00000340437 SKILP12757 684 aa16.87■□□□□ 0.29
CPSF7-201ENST00000340437 LRRC24Q50LG9 513 aa16.87■□□□□ 0.29
CPSF7-201ENST00000340437 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
CPSF7-201ENST00000340437 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
CPSF7-201ENST00000340437 PTPN21Q16825 1174 aa16.86■□□□□ 0.29
CPSF7-201ENST00000340437 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
CPSF7-201ENST00000340437 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
CPSF7-201ENST00000340437 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
CPSF7-201ENST00000340437 STK38Q15208 465 aa16.86■□□□□ 0.29
CPSF7-201ENST00000340437 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
CPSF7-201ENST00000340437 ZNF609O15014 1411 aa16.86■□□□□ 0.29
CPSF7-201ENST00000340437 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
CPSF7-201ENST00000340437 RXRAP19793 462 aa16.85■□□□□ 0.29
CPSF7-201ENST00000340437 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
CPSF7-201ENST00000340437 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
CPSF7-201ENST00000340437 TTLL7Q6ZT98 887 aa16.85■□□□□ 0.29
CPSF7-201ENST00000340437 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-201ENST00000340437 CPLX1O14810 134 aa16.85■□□□□ 0.29
CPSF7-201ENST00000340437 TDRD7Q8NHU6 1098 aaKnown RBP16.85■□□□□ 0.29
CPSF7-201ENST00000340437 COPRSQ9NQ92 184 aa16.85■□□□□ 0.29
CPSF7-201ENST00000340437 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 A1BGP04217 495 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 STX1AQ16623 288 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 SMAP1Q8IYB5 467 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-201ENST00000340437 E7EWF7 191 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 PLA2G4DQ86XP0 818 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 KBTBD3Q8NAB2 608 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 CTDNEP1O95476 244 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
CPSF7-201ENST00000340437 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-201ENST00000340437 APPP05067 770 aa16.83■□□□□ 0.29
CPSF7-201ENST00000340437 MARCKSP29966 332 aaPredicted RBP16.83■□□□□ 0.29
CPSF7-201ENST00000340437 HAUS7Q99871 368 aa16.83■□□□□ 0.29
CPSF7-201ENST00000340437 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
CPSF7-201ENST00000340437 PRDM4Q9UKN5 801 aa16.83■□□□□ 0.28
CPSF7-201ENST00000340437 PHKG2P15735 406 aa16.83■□□□□ 0.28
CPSF7-201ENST00000340437 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
CPSF7-201ENST00000340437 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.285e-10■■■■■ 57.2
CPSF7-201ENST00000340437 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms