RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 RXRAP19793 462 aa13.88□□□□□ -0.19
EFCAB13-201ENST00000331493 GPTP24298 496 aa13.88□□□□□ -0.19
EFCAB13-201ENST00000331493 FSIP1Q8NA03 581 aa13.88□□□□□ -0.19
EFCAB13-201ENST00000331493 ATP2B1P20020 1258 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 LRRC24Q50LG9 513 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 PPP4R3BQ5MIZ7 849 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 PTPDC1A2A3K4 754 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 RIOK3O14730 519 aaKnown RBP13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 MTX1Q13505 466 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 STK38Q15208 465 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 CFAP45Q9UL16 551 aa13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
EFCAB13-201ENST00000331493 SCRN1Q12765 414 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 SMC2O95347 1197 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 ARID5BQ14865 1188 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 TTC39AQ5SRH9 613 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 PGBD1Q96JS3 809 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 DDX19AQ9NUU7 478 aaKnown RBP13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 PXDNQ92626 1479 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 A0A1B0GVL5 298 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 TNNT1P13805 278 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 PDIA6Q15084 440 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 MAP7D2Q96T17 732 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
EFCAB13-201ENST00000331493 HSP90AA4PQ58FG1 418 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 MYRIPQ8NFW9 859 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 KCNF1Q9H3M0 494 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 PHKG2P15735 406 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 CCDC57Q2TAC2 916 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 PRDM11Q9NQV5 511 aa13.85□□□□□ -0.19
EFCAB13-201ENST00000331493 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 PI16Q6UXB8 463 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 PDCL2Q8N4E4 241 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 ATP5JP18859 108 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 IDH1O75874 414 aaKnown RBP13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 FAM89AQ96GI7 184 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 EVA1CP58658 441 aa13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 NAA30Q147X3 362 aaPredicted RBP13.84□□□□□ -0.19
EFCAB13-201ENST00000331493 ERBB3P21860 1342 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 STOX1Q6ZVD7 989 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 DHX32Q7L7V1 743 aaKnown RBP13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 AOPEPQ8N6M6 819 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 CYP27B1O15528 508 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 CCDC158Q5M9N0 1113 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 KIAA1524Q8TCG1 905 aa13.83□□□□□ -0.2
EFCAB13-201ENST00000331493 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
EFCAB13-201ENST00000331493 PIK3C2AO00443 1686 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 ZNF75DP51815 510 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 ZNF396Q96N95 335 aaPredicted RBP13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 COPRSQ9NQ92 184 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 ORC3Q9UBD5 711 aaPredicted RBP13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 E7EWF7 191 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 ADORA1P30542 326 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 TRDNQ13061 729 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 ZBTB9Q96C00 473 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
EFCAB13-201ENST00000331493 TPM3P06753 285 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 TERF1P54274 439 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 SYNE4Q8N205 404 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
EFCAB13-201ENST00000331493 SKILP12757 684 aa13.79□□□□□ -0.2
EFCAB13-201ENST00000331493 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms