RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
LMX1A-201ENST00000294816 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 KRBA2Q6ZNG9 492 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.96□□□□□ -0.49
LMX1A-201ENST00000294816 ARMCX5Q6P1M9 558 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 ZNF396Q96N95 335 aaPredicted RBP11.96□□□□□ -0.49
LMX1A-201ENST00000294816 SEC62Q99442 399 aaKnown RBP11.96□□□□□ -0.49
LMX1A-201ENST00000294816 FAM53CQ9NYF3 392 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
LMX1A-201ENST00000294816 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.49
LMX1A-201ENST00000294816 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.5
LMX1A-201ENST00000294816 DPCR1Q3MIW9 517 aa11.96□□□□□ -0.5
LMX1A-201ENST00000294816 NBPF11Q86T75 865 aa11.96□□□□□ -0.5
LMX1A-201ENST00000294816 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.5
LMX1A-201ENST00000294816 USP42Q9H9J4 1324 aaKnown RBP11.96□□□□□ -0.5
LMX1A-201ENST00000294816 CHGBP05060 677 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 NLRP6P59044 892 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 GOLGA8FQ08AF8 430 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 GOLGA8DPQ0D2H9 430 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 TEFQ10587 303 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 SCRN1Q12765 414 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 FLT4P35916 1363 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 ST5P78524 1137 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 APOBRQ0VD83 1088 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 PTPDC1A2A3K4 754 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 OAS2P29728 719 aaKnown RBP11.95□□□□□ -0.5
LMX1A-201ENST00000294816 GYS2P54840 703 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 STK38Q15208 465 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
LMX1A-201ENST00000294816 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 EVCP57679 992 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 GPS2Q13227 327 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 KRT32Q14532 448 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
LMX1A-201ENST00000294816 RCOR1Q9UKL0 485 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 SASH1O94885 1247 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 ETF1P62495 437 aaKnown RBP11.94□□□□□ -0.5
LMX1A-201ENST00000294816 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
LMX1A-201ENST00000294816 MRPS27Q92552 414 aaKnown RBP11.94□□□□□ -0.5
LMX1A-201ENST00000294816 ADCY9O60503 1353 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 TAF5LO75529 589 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 CREBRFQ8IUR6 639 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 OSBPL5Q9H0X9 879 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 IMPACTQ9P2X3 320 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 SERPINC1P01008 464 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 POLR3DP05423 398 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 FEZ2Q9UHY8 353 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 CEP170BQ9Y4F5 1589 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 HSP90AA4PQ58FG1 418 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 BICC1Q9H694 974 aaKnown RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 ZSWIM4Q9H7M6 989 aa11.93□□□□□ -0.5
LMX1A-201ENST00000294816 XRN1Q8IZH2 1706 aaKnown RBP11.93□□□□□ -0.5
LMX1A-201ENST00000294816 LMAN1P49257 510 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 NDUFA8P51970 172 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 SUCLG2Q96I99 432 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 TULP2O00295 520 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
LMX1A-201ENST00000294816 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
LMX1A-201ENST00000294816 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
LMX1A-201ENST00000294816 PDILTQ8N807 584 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 TSPYL1Q9H0U9 437 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
LMX1A-201ENST00000294816 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
LMX1A-201ENST00000294816 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
LMX1A-201ENST00000294816 NPHP4O75161 1426 aaPredicted RBP11.91□□□□□ -0.5
LMX1A-201ENST00000294816 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 ADGRL3Q9HAR2 1447 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 ATP1A3P13637 1013 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 FAM193AP78312 1265 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 FANCCQ00597 558 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 PROSER3Q2NL68 480 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 CCDC93Q567U6 631 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 ENGASEQ8NFI3 743 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 DIP2BQ9P265 1576 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 CYP21A2P08686 494 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 GNG11P61952 73 aa11.91□□□□□ -0.5
LMX1A-201ENST00000294816 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
LMX1A-201ENST00000294816 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms