RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 V9GYY5 206 aaPredicted RBP15.26■□□□□ 0.03
SEC23B-201ENST00000262544 NPHP3Q7Z494 1330 aa15.26■□□□□ 0.03
SEC23B-201ENST00000262544 GOLGA6L6A8MZA4 724 aa15.26■□□□□ 0.03
SEC23B-201ENST00000262544 RXRAP19793 462 aa15.26■□□□□ 0.03
SEC23B-201ENST00000262544 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
SEC23B-201ENST00000262544 SLIT1O75093 1534 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 STOX1Q6ZVD7 989 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 COL15A1P39059 1388 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 DYNC1I1O14576 645 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 SNRPA1P09661 255 aaKnown RBP15.25■□□□□ 0.03
SEC23B-201ENST00000262544 NAA30Q147X3 362 aaPredicted RBP15.25■□□□□ 0.03
SEC23B-201ENST00000262544 SF3A1Q15459 793 aaKnown RBP15.25■□□□□ 0.03
SEC23B-201ENST00000262544 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 CCDC144CPQ8IYA2 1237 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 KIF3AQ9Y496 699 aa15.25■□□□□ 0.03
SEC23B-201ENST00000262544 ERBB3P21860 1342 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
SEC23B-201ENST00000262544 ARHGAP23Q9P227 1491 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 PHKG2P15735 406 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 FUCA2Q9BTY2 467 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 CLIP2Q9UDT6 1046 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 NALCNQ8IZF0 1738 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 TOPAZ1Q8N9V7 1692 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 PTPDC1A2A3K4 754 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 CYP27B1O15528 508 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 CCAR1Q8IX12 1150 aaKnown RBP15.24■□□□□ 0.03
SEC23B-201ENST00000262544 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
SEC23B-201ENST00000262544 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 SDF4Q9BRK5 362 aa15.24■□□□□ 0.03
SEC23B-201ENST00000262544 APPP05067 770 aa15.23■□□□□ 0.03
SEC23B-201ENST00000262544 IFIT1P09914 478 aaKnown RBP15.23■□□□□ 0.03
SEC23B-201ENST00000262544 PPP4R3BQ5MIZ7 849 aa15.23■□□□□ 0.03
SEC23B-201ENST00000262544 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
SEC23B-201ENST00000262544 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
SEC23B-201ENST00000262544 TPD52L1Q16890 204 aaPredicted RBP15.23■□□□□ 0.03
SEC23B-201ENST00000262544 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 ATF3P18847 181 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 GPTP24298 496 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
SEC23B-201ENST00000262544 PAG1Q9NWQ8 432 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
SEC23B-201ENST00000262544 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
SEC23B-201ENST00000262544 MYRIPQ8NFW9 859 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 USP28Q96RU2 1077 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 HSP90AA4PQ58FG1 418 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 C11orf57Q6ZUT1 292 aaPredicted RBP15.22■□□□□ 0.03
SEC23B-201ENST00000262544 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
SEC23B-201ENST00000262544 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.03
SEC23B-201ENST00000262544 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
SEC23B-201ENST00000262544 ATP5JP18859 108 aa15.21■□□□□ 0.03
SEC23B-201ENST00000262544 KIAA1524Q8TCG1 905 aa15.21■□□□□ 0.03
SEC23B-201ENST00000262544 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
SEC23B-201ENST00000262544 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
SEC23B-201ENST00000262544 ZNF609O15014 1411 aa15.21■□□□□ 0.02
SEC23B-201ENST00000262544 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
SEC23B-201ENST00000262544 CCDC82Q8N4S0 544 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 A0A1B0GUL7 405 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
SEC23B-201ENST00000262544 EPB41L2O43491 1005 aaKnown RBP15.2■□□□□ 0.02
SEC23B-201ENST00000262544 ADORA1P30542 326 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 KRT32Q14532 448 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 CCDC144BQ3MJ40 725 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 ANKARQ7Z5J8 1434 aa15.2■□□□□ 0.02
SEC23B-201ENST00000262544 LTN1O94822 1766 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 CPLX1O14810 134 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 NPHP4O75161 1426 aaPredicted RBP15.19■□□□□ 0.02
SEC23B-201ENST00000262544 TNNT1P13805 278 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 U2AF2P26368 475 aaKnown RBP eCLIP15.19■□□□□ 0.027e-8■■□□□ 12.2
SEC23B-201ENST00000262544 ZBTB9Q96C00 473 aa15.19■□□□□ 0.02
SEC23B-201ENST00000262544 MARCKSP29966 332 aaPredicted RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 CACTINQ8WUQ7 758 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 CLSTN2Q9H4D0 955 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 TOMM22Q9NS69 142 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 DDX19AQ9NUU7 478 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 HMGN5P82970 282 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 DHX32Q7L7V1 743 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 CFAP45Q9UL16 551 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 NBPF26B4DH59 902 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 E7EWF7 191 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 ATP2B1P20020 1258 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
SEC23B-201ENST00000262544 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
SEC23B-201ENST00000262544 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms