RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ADGRL3Q9HAR2 1447 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 KINO60870 393 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 CCDC186Q7Z3E2 898 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 FAM208AQ9UK61 1670 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-201ENST00000247833 CFAP45Q9UL16 551 aa14.84□□□□□ -0.03
RAB3IP-201ENST00000247833 LRRC24Q50LG9 513 aa14.84□□□□□ -0.03
RAB3IP-201ENST00000247833 DDX19AQ9NUU7 478 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-201ENST00000247833 FILIP1Q7Z7B0 1213 aa14.84□□□□□ -0.03
RAB3IP-201ENST00000247833 GPTP24298 496 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 TTLL5Q6EMB2 1281 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 PIBF1Q8WXW3 757 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 GTF3C6Q969F1 213 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 XRN1Q8IZH2 1706 aaKnown RBP14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 PTPDC1A2A3K4 754 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 CCDC158Q5M9N0 1113 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 KBTBD3Q8NAB2 608 aa14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 C16orf45Q96MC5 204 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-201ENST00000247833 CBX8Q9HC52 389 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 STK11IPQ8N1F8 1099 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 PUS3Q9BZE2 481 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 KIF13AQ9H1H9 1805 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 A0A1B0GUL7 405 aa14.82□□□□□ -0.04
RAB3IP-201ENST00000247833 SCRN1Q12765 414 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 DHX32Q7L7V1 743 aaKnown RBP14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 DYNC1I1O14576 645 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 HMGN5P82970 282 aaKnown RBP14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 A0A0G2JLW4 131 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 LRMPQ12912 555 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 STK38Q15208 465 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
RAB3IP-201ENST00000247833 FAM89AQ96GI7 184 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 HAUS7Q99871 368 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 CLIP2Q9UDT6 1046 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 NCAPD2Q15021 1401 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 AP5Z1O43299 807 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 TPD52L1Q16890 204 aaPredicted RBP14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 NRBP1Q9UHY1 535 aa14.8□□□□□ -0.04
RAB3IP-201ENST00000247833 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 IL17RAQ96F46 866 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 ZNF396Q96N95 335 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 CACNA1FO60840 1977 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 BIN1O00499 593 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 IDH1O75874 414 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 PDIA4P13667 645 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 NPHP4O75161 1426 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 HMGB1P09429 215 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 TRDNQ13061 729 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 SYNE3Q6ZMZ3 975 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
RAB3IP-201ENST00000247833 ISM2Q6H9L7 571 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 STOX1Q6ZVD7 989 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 PGBD1Q96JS3 809 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 CLSTN2Q9H4D0 955 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 GOLGA8BA8MQT2 603 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 EYA2O00167 538 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 TPM3P06753 285 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 CCDC144CPQ8IYA2 1237 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 E7EWF7 191 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 USP28Q96RU2 1077 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 MAP7D2Q96T17 732 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 UTYO14607 1347 aa14.78□□□□□ -0.04
RAB3IP-201ENST00000247833 LTN1O94822 1766 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 ZNF609O15014 1411 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 NBPF26B4DH59 902 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 RNF113AO15541 343 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 HSPD1P10809 573 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 RFX5P48382 616 aaPredicted RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 IMMTQ16891 758 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 LRRFIP1Q32MZ4 808 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 NBPF14Q5TI25 921 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 NBPF10Q6P3W6 841 aaKnown RBP14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 PI16Q6UXB8 463 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 NBPF15Q8N660 670 aa14.77□□□□□ -0.04
RAB3IP-201ENST00000247833 KLF18A0A0U1RQI7 1052 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 RXRAP19793 462 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 HSPA2P54652 639 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 KCNB2Q92953 911 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 C8orf76Q96K31 380 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 ZMYND15Q9H091 742 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 FER1L4A9Z1Z3 1794 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 ADORA1P30542 326 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
RAB3IP-201ENST00000247833 TERF1P54274 439 aa14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 A0A1B0GVL5 298 aa14.76□□□□□ -0.05
RAB3IP-201ENST00000247833 IFIT5Q13325 482 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms