RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 RXRAP19793 462 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 PHKA1P46020 1223 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 SASH1O94885 1247 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
TTC17-201ENST00000039989 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 BRF1Q92994 677 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
TTC17-201ENST00000039989 PRDM1O75626 825 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 SERPINB2P05120 415 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
TTC17-201ENST00000039989 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 ZKSCAN3Q9BRR0 538 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 MMP10P09238 476 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 PDIA6Q15084 440 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
TTC17-201ENST00000039989 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 DCCP43146 1447 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 MBD4O95243 580 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 CHRNDQ07001 517 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 CRACR2BQ8N4Y2 399 aaPredicted RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
TTC17-201ENST00000039989 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
TTC17-201ENST00000039989 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
TTC17-201ENST00000039989 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 CHGBP05060 677 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
TTC17-201ENST00000039989 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
TTC17-201ENST00000039989 SPATA31A6Q5VVP1 1343 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 TTC41PQ6P2S7 1318 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
TTC17-201ENST00000039989 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
TTC17-201ENST00000039989 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 CPDO75976 1380 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 IQSEC2Q5JU85 1478 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 RNF113AO15541 343 aaKnown RBP12.84□□□□□ -0.35
TTC17-201ENST00000039989 SSFA2P28290 1259 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 IBTKQ9P2D0 1353 aaPredicted RBP12.84□□□□□ -0.35
TTC17-201ENST00000039989 POLD1P28340 1107 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 NUCB2P80303 420 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
TTC17-201ENST00000039989 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
TTC17-201ENST00000039989 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 VAT1LQ9HCJ6 419 aa12.84□□□□□ -0.35
TTC17-201ENST00000039989 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC17-201ENST00000039989 H0YIN7 160 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 LPIN2Q92539 896 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 H7C1W4 665 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 CLSTN1O94985 981 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 RNF214Q8ND24 703 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
TTC17-201ENST00000039989 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 COPRSQ9NQ92 184 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
TTC17-201ENST00000039989 PTH1RQ03431 593 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 COL15A1P39059 1388 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 GTF2IP78347 998 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 DRC7Q8IY82 874 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 PDE8BO95263 885 aa12.82□□□□□ -0.36
TTC17-201ENST00000039989 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms