RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Zkscan4Q5SZT6 480 aa15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ube2oQ6ZPJ3 1288 aa15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Tmem87aQ8BXN9 555 aa15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Otud6bQ8K2H2 294 aa15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Tns3Q5SSZ5 1440 aa15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Tcof1O08784 1320 aaKnown RBP15.39■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ess2O70279 479 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Dhx40Q6PE54 779 aaKnown RBP15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ccdc155Q80VJ8 648 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 TkfcQ8VC30 578 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Telo2Q9DC40 840 aaKnown RBP15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Wdr19Q3UGF1 1341 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Thsd7aQ69ZU6 1645 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 FocadA2AKG8 1798 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 AtrnQ9WU60 1428 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Rgs9O54828 675 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 U2af2P26369 475 aaKnown RBP15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 GpkowQ56A08 488 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Gm21985Q6P6P5 1106 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Zfp397Q7TNK4 527 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Hook1Q8BIL5 728 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ccdc158Q8CDI6 1109 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Kcnk13Q8R1P5 405 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Phkg2Q9DB30 406 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Naa16Q9DBB4 864 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Col4a3bpQ9EQG9 624 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 TefQ9JLC6 301 aa15.38■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Sos2Q02384 1333 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Tnks1bp1P58871 1720 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Card6E9PWH2 1175 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Gnat3Q3V3I2 354 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 ZyxQ62523 564 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Cep135Q6P5D4 1140 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 ThemisQ8BGW0 636 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Slu7Q8BHJ9 585 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Dis3l2Q8CI75 870 aaKnown RBP15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Pcdhb15Q91Y04 786 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Dusp10Q9ESS0 483 aa15.37■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Anks1aP59672 1150 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ddx58Q6Q899 926 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Q8BZJ8 459 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Atad2Q8CDM1 1040 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Abca3Q8R420 1704 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Surf1P09925 306 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Taf3Q5HZG4 932 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 NfkbibQ60778 359 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 TfrcQ62351 763 aaKnown RBP15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Gpatch3Q8BIY1 525 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Fam102bQ8BQS4 339 aa15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ddx41Q91VN6 622 aaKnown RBP15.36■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ttll7A4Q9F0 912 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Prl7a2O54831 253 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Neurod6P48986 337 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Vps54Q5SPW0 977 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ncaph2Q8BSP2 607 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Rgs12Q8CGE9 1381 aa15.35■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Gm10471E9Q1C7 252 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ankle2Q6P1H6 964 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Q8C5K5 320 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Sox30Q8CGW4 782 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Chmp7Q8R1T1 451 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Rufy2Q8R4C2 606 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Npc1l1Q6T3U4 1333 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Sall1Q9ER74 1322 aa15.34■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Prl3d3A0A0M6L0J6 224 aa15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Dhx8A2A4P0 1244 aaKnown RBP15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ap5z1Q3U829 807 aa15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Tmc2Q8R4P4 888 aa15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Ssfa2Q922B9 1252 aa15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 CenpqQ9CPQ5 267 aa15.33■□□□□ 0.05
Ssr1-203ENSMUST00000225246 Cyp2d10P24456 504 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 GapdhsQ64467 440 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Prkab2Q6PAM0 271 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Nxf7Q80SZ6 620 aaKnown RBP15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Dnajc14Q921R4 703 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Rdm1Q9CQK3 281 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Ppil4Q9CXG3 492 aaKnown RBP15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Zkscan5Q9Z1D8 819 aa15.33■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Sult6b1P0CC03 303 aa15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Cnnm1Q0GA42 951 aa15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Ddx46Q569Z5 1032 aaKnown RBP15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 IbspQ61711 324 aa15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Ifit1Q64282 463 aa15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Arid5bQ8BM75 1188 aaKnown RBP15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Golph3lQ8R088 285 aaKnown RBP15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Chrna2Q91X60 512 aa15.32■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Usp42B2RQC2 1324 aaKnown RBP15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Atp2b1G5E829 1220 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 NmiO35309 314 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Tpm1P58771 284 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Hspd1P63038 573 aaKnown RBP15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 LyarQ08288 388 aaKnown RBP15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 NpeppsQ11011 920 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Atg9aQ68FE2 551 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Srek1Q8BZX4 494 aaKnown RBP15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 XpcP51612 930 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Ccdc129Q14B48 1034 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Mctp2Q5RJH2 878 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Panx2Q6IMP4 677 aa15.31■□□□□ 0.04
Ssr1-203ENSMUST00000225246 Dhx38Q80X98 1228 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms