RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Zkscan5Q9Z1D8 819 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Kcnh4A2A5F7 1018 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Shank3Q4ACU6 1730 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Rnf20Q5DTM8 973 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 BcanQ61361 883 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 AbraQ8BUZ1 375 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Atf7Q8R0S1 413 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Nip7Q9CXK8 180 aaKnown RBP12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 PhaxQ9JJT9 385 aaKnown RBP12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 AtrnQ9WU60 1428 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Hdac6Q9Z2V5 1149 aa12.4□□□□□ -0.42
Ptpre-208ENSMUST00000211788 Zfp804bA0A0G2JGH6 1343 aa12.4□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Gm9992B2RWK3 458 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Lmod3E9QA62 571 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Nucb2P81117 420 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Tbc1d30Q69ZT9 766 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Unc93aQ710D3 458 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Mrpl50Q8VDT9 159 aaKnown RBP12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 StrbpQ91WM1 672 aaKnown RBP12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Eya2O08575 532 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 U2af2P26369 475 aaKnown RBP12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Golim4Q8BXA1 655 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Nav1Q8CH77 1875 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 PappaQ8R4K8 1624 aa12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Mybbp1aQ7TPV4 1344 aaKnown RBP12.39□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Cavin1O54724 392 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Trim30aP15533 496 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Bach2P97303 839 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 NpeppsQ11011 920 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Nol10Q5RJG1 687 aaKnown RBP12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Gnl3lQ6PGG6 577 aaKnown RBP12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Dcaf5Q80T85 946 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Zmynd15Q8C0R7 736 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Fam84aQ9D650 292 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Psma5Q9Z2U1 241 aaKnown RBP12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 1700006A11RikB9EHI3 544 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Taf3Q5HZG4 932 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Sik1Q60670 779 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Nek11Q8C0Q4 628 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 GptQ8QZR5 496 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Gigyf1Q99MR1 1044 aaKnown RBP12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Pus3Q9JI38 481 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Stx6Q9JKK1 255 aa12.38□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ric1Q69ZJ7 1422 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Tnrc6cQ3UHC0 1690 aaKnown RBP12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ercc3P49135 783 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Gsdma2Q32M21 443 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Rbm27Q5SFM8 1060 aaKnown RBP12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ltv1Q6NSQ7 470 aaKnown RBP12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ncoa5Q91W39 579 aaKnown RBP12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ccdc129Q14B48 1034 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Usp48Q3V0C5 1052 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Sp8Q8BMJ8 486 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Fam102bQ8BQS4 339 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 SnrkQ8VDU5 748 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Rbm42Q91V81 474 aaKnown RBP12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Pcdhgc5Q91XW9 944 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Iqca1Q9CUL5 857 aa12.37□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Syce3B5KM66 88 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Kif4P33174 1231 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Kiaa0754Q69ZZ9 979 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Clca2Q8BG22 942 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Rps6kb1Q8BSK8 525 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Tsr2Q8C8T8 191 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Klhl34A2AI76 644 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Cyp19a1P28649 503 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Exoc5Q3TPX4 708 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Mb21d2Q8C525 428 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Rassf8Q8CJ96 419 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Krt25Q8VCW2 446 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Lrrfip2Q91WK0 415 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Bmp2kQ91Z96 1138 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ybx3Q9JKB3 361 aaKnown RBP12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Hmg20bQ9Z104 317 aa12.36□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Marf1Q8BJ34 1730 aaKnown RBP12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Jmjd4Q8BFT6 427 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Znf526Q8BI66 675 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Lmbrd2Q8C561 694 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Phf20l1Q8CCJ9 1013 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ccar2Q8VDP4 922 aaKnown RBP12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Zbtb1Q91VL9 713 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Lrrc59Q922Q8 307 aaKnown RBP12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Erc1Q99MI1 1120 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Vps33aQ9D2N9 598 aa12.35□□□□□ -0.43
Ptpre-208ENSMUST00000211788 RubcnlQ3TD16 648 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 EappQ5BU09 281 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 ZyxQ62523 564 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Asap2Q7SIG6 958 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ciao1Q99KN2 339 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Sh3bp5Q9Z131 463 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Sipa1l3G3X9J0 1776 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Slc4a1P04919 929 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Anxa1P10107 346 aaKnown RBP12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Cyp2d10P24456 504 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Babam1Q3UI43 333 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Ccdc34Q3UI66 367 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Tmem266Q8BZB3 538 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Nlrp3Q8R4B8 1033 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Bcl11bQ99PV8 884 aa12.34□□□□□ -0.43
Ptpre-208ENSMUST00000211788 Creld2Q9CYA0 350 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms