RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Nap1l3Q794H2 544 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Sgsm1Q8BPQ7 1093 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 R3hcc1Q8BSI6 488 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Adam1bQ8R534 806 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Add2Q9QYB8 725 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 CrcpO35427 148 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tshz2Q68FE9 1030 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 StrbpQ91WM1 672 aaKnown RBP11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Samd1D3YXK1 519 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Washc4Q3UMB9 1173 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rps6kb1Q8BSK8 525 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ccdc158Q8CDI6 1109 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tmem143Q8VD26 458 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Stx6Q9JKK1 255 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Npc1l1Q6T3U4 1333 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Fkbp1aP26883 108 aaKnown RBP11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ubxn10Q8BG34 277 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 ImmtQ8CAQ8 757 aaKnown RBP11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Cep57l1Q8VDS7 400 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 ImpactO55091 318 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pcmtd1P59913 357 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Plbd2Q3TCN2 594 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Fam102bQ8BQS4 339 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Sugp2Q8CH09 1067 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 NpeppsQ11011 920 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Nlrp9aQ66X03 949 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Susd4Q8BH32 490 aa11.31□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Bin2D3Z6Q9 489 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rrp12Q6P5B0 1295 aaKnown RBP11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Foxo4Q9WVH3 505 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Prl7d1P04769 244 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Kif4P33174 1231 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Isy1Q69ZQ2 285 aaKnown RBP11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ppp6r1Q7TSI3 856 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pms1Q8K119 917 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 SlkO54988 1233 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Fbln2P37889 1221 aa11.3□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pde8bE9Q4S1 865 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Babam1Q3UI43 333 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Slfnl1Q8BHW9 410 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Taok3Q8BYC6 898 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Stox1B2RQL2 990 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Sparcl1P70663 650 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ift57Q8BXG3 429 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Gripap1Q8VD04 806 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ppil4Q9CXG3 492 aaKnown RBP11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pus3Q9JI38 481 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 CltaO08585 235 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Odf2lQ9D478 642 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Foxo3Q9WVH4 672 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Cyp3a57D3YYZ0 503 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Prl7a2O54831 253 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Stat1P42225 749 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pkp1P97350 728 aaKnown RBP11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Hand2Q61039 217 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Gm21985Q6P6P5 1106 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Bmp2kQ91Z96 1138 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Akap11E9Q777 1895 aa11.29□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Nav1Q8CH77 1875 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Elmsan1E9Q2I4 1089 aaKnown RBP11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ppfibp2O35711 882 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Pdlim2Q8R1G6 349 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Prl3d1P18121 224 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Zcrb1Q9CZ96 217 aaKnown RBP11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tbc1d7Q9D0K0 293 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Appbp2Q9DAX9 585 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tjp1P39447 1745 aaKnown RBP11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Cyp2c23E9Q5K4 494 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Slc4a1P04919 929 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Kif20aP97329 887 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Atp1b3P97370 278 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Mb21d2Q8C525 428 aa11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ufl1Q8CCJ3 793 aaKnown RBP11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rbm5Q91YE7 815 aaKnown RBP11.28□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Agtpbp1Q641K1 1218 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Fsd1Q7TPM6 496 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 RtcbQ99LF4 505 aaKnown RBP11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ccdc47Q9D024 483 aaKnown RBP11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Hspd1P63038 573 aaKnown RBP11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Slc38a10Q5I012 1090 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Bms1Q6PGF5 1284 aaKnown RBP11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ppp1r10Q80W00 888 aaKnown RBP11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Bloc1s2Q9CWG9 143 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Fam84aQ9D650 292 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ccne2Q9Z238 404 aa11.27□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 FosbP13346 338 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ddit3P35639 168 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Mrc1Q61830 1456 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Zdhhc9P59268 364 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Rufy2Q8R4C2 606 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 ZwintQ9CQU5 252 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 ParvgQ9ERD8 331 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ube3bQ9ES34 1070 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 AtrnQ9WU60 1428 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Trip6Q9Z1Y4 480 aa11.27□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ercc3P49135 783 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Zfp91Q62511 572 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Fsd2Q8BZ52 692 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 HmcesQ8R1M0 353 aaKnown RBP11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Slc7a3P70423 618 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms