RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Cavin1O54724 392 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Hmox1P14901 289 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Grxcr1Q50H32 290 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Srgap3Q812A2 1099 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Cchcr1Q8K2I2 770 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Astn2Q80Z10 1352 aa12.21□□□□□ -0.45
Pdlim5-204ENSMUST00000168967 Mcm10Q0VBD2 885 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Fhdc1Q3ULZ2 1149 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Pde3bQ61409 1100 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Afap1Q80YS6 731 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Fam43aQ8BUP8 424 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ttc27Q8CD92 847 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ccdc178Q8CDV0 866 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Plcd3Q8K2J0 785 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ppp1r42Q8R1Z4 357 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Nop14Q8R3N1 860 aaKnown RBP12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Zc3h13E9Q784 1729 aaKnown RBP12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Znf335A2A5K6 1337 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Elmsan1E9Q2I4 1089 aaKnown RBP12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Eif4a2P10630 407 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ms4a1P19437 291 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 RdxP26043 583 aaKnown RBP12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Thsd4Q3UTY6 1018 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Oxsr1Q6P9R2 527 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Zscan22Q8BGS5 496 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Pmfbp1Q9WVQ0 1022 aa12.2□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Nphp3Q7TNH6 1325 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Itsn1Q9Z0R4 1714 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 FechP22315 420 aaKnown RBP12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cdkn1cP49919 348 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Rab3gap1Q80UJ7 981 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Dpp8Q80YA7 892 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Stx6Q9JKK1 255 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Rad50P70388 1312 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 FancaQ9JL70 1439 aa12.19□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 ColqO35348 457 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Fam13bQ8K2H3 851 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cts7Q91ZF2 331 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Igbp1bQ9QZ29 343 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cps1Q8C196 1500 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ubn2Q80WC1 1314 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 CemipQ8BI06 1361 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cfap73J3QPZ5 306 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cpa2Q504N0 417 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 TmpoQ61033 693 aaKnown RBP12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Znf511Q6P0X2 227 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 CtifQ6PEE2 600 aaKnown RBP12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Prune1Q8BIW1 454 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Jakmip1Q8BVL9 626 aa12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Smc3Q9CW03 1217 aaKnown RBP12.18□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Zkscan7E9PVW1 718 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Trim30aP15533 496 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cct4P80315 539 aaKnown RBP12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Bmp2kQ91Z96 1138 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Slx4ipQ9D7Y9 413 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Utp3Q9JI13 469 aaKnown RBP12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Hmgn5Q9JL35 406 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Mmel1Q9JLI3 765 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Ercc6l2Q9JIM3 1537 aa12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Mybbp1aQ7TPV4 1344 aaKnown RBP12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Wdr33Q8K4P0 1330 aaKnown RBP12.17□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Trpm3Q5F4S9 1721 aa12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Msh6P54276 1358 aaKnown RBP12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Sass6Q80UK7 654 aa12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Nup88Q8CEC0 753 aaKnown RBP12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Sf3a1Q8K4Z5 791 aaKnown RBP12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Tbc1d8Q9Z1A9 1134 aa12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Atp8b3Q6UQ17 1335 aa12.16□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Prss12O08762 761 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Rad17Q6NXW6 688 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Znf316Q6PGE4 1016 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Rbm42Q91V81 474 aaKnown RBP12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Mtfr1Q99MB2 328 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Add3Q9QYB5 706 aaKnown RBP12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Syt1P46096 421 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Samm50Q8BGH2 469 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Cep57l1Q8VDS7 400 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 NaspQ99MD9 773 aaKnown RBP12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 BccipQ9CWI3 316 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 Add2Q9QYB8 725 aa12.15□□□□□ -0.46
Pdlim5-204ENSMUST00000168967 PzpQ61838 1495 aa12.15□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Ptpn23Q6PB44 1692 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 NalcnQ8BXR5 1738 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 1700019A02RikA0A087WPV9 146 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Usp25P57080 1055 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Gjb2Q00977 226 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Bms1Q6PGF5 1284 aaKnown RBP12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Eva1bQ8K2Y3 164 aa12.14□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Pik3c2bE9QAN8 1632 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Cdk4P30285 303 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 MpripP97434 1024 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Rc3h1Q4VGL6 1130 aaKnown RBP12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Ccne1Q61457 408 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Unc5clQ6R653 518 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Rufy3Q9D394 469 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Tpx2A2APB8 745 aaKnown RBP12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Cwc27Q3TKY6 469 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Kcnf1Q7TSH7 493 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Wdr24Q8CFJ9 790 aa12.13□□□□□ -0.47
Pdlim5-204ENSMUST00000168967 Zfp804bA0A0G2JGH6 1343 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms