RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Irx4Q9QY61 515 aa13.52□□□□□ -0.25
Vps54-202ENSMUST00000109578 Aox4Q3TYQ9 1336 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tbc1d4Q8BYJ6 1307 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Lekr1B2RVN1 116 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Cbx1P83917 185 aaKnown RBP13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hand2Q61039 217 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ddx58Q6Q899 926 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Nlrp3Q8R4B8 1033 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Speer4bQ9D9F7 267 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm973E9Q295 1059 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ankle2Q6P1H6 964 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hook1Q8BIL5 728 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Erc1Q99MI1 1120 aa13.51□□□□□ -0.25
Vps54-202ENSMUST00000109578 Prl3d3A0A0M6L0J6 224 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hspd1P63038 573 aaKnown RBP13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Gm21985Q6P6P5 1106 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Sass6Q80UK7 654 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Frmd3Q8BHD4 595 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tlcd1Q99JT6 247 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hmgn5Q9JL35 406 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Smarcc2Q6PDG5 1213 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ccz1Q8C1Y8 480 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tubb6Q922F4 447 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Mrpl44Q9CY73 333 aaKnown RBP13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Osbpl5Q9ER64 874 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Zfp251Q6PCX8 632 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Atp2b3Q0VF55 1220 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 NfkbibQ60778 359 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ccdc82Q6PG04 518 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 RgmbQ7TQ33 436 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Slc5a1Q8C3K6 665 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tmc2Q8R4P4 888 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ccdc94Q9D6J3 314 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Dusp10Q9ESS0 483 aa13.5□□□□□ -0.25
Vps54-202ENSMUST00000109578 Card6E9PWH2 1175 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Rgs9O54828 675 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tpm3P21107 285 aaKnown RBP13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 RdxP26043 583 aaKnown RBP13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Zbtb40Q6PCS8 1258 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ifi35Q9D8C4 286 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Col4a1P02463 1669 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Spty2d1Q68FG3 682 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Nlrp1aQ2LKU9 1182 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Kiaa0754Q69ZZ9 979 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tmem67Q8BR76 992 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Siglec1Q62230 1695 aa13.49□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tns2Q8CGB6 1400 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Exosc10P56960 887 aaKnown RBP13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 ZyxQ62523 564 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Snw1Q9CSN1 536 aaKnown RBP13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 IncenpQ9WU62 880 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ccdc112A0AUP1 442 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Atp2b1G5E829 1220 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Mtmr3Q8K296 1196 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Alg3Q8K2A8 438 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ltb4r2Q9JJL9 360 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Lmtk3Q5XJV6 1424 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Cdkn1cP49919 348 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Card10P58660 1021 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Adam1aQ60813 791 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Golph3lQ8R088 285 aaKnown RBP13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Chrna2Q91X60 512 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ccer1Q9CQL2 403 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Rimbp3Q3V0F0 1606 aa13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tjp1P39447 1745 aaKnown RBP13.48□□□□□ -0.25
Vps54-202ENSMUST00000109578 TrdnE9Q9K5 693 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Cdk4P30285 303 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Kcna6Q61923 529 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Flad1Q8R123 492 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Morc2aQ69ZX6 1030 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ppp4r3aQ6P2K6 820 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Fbxo2Q80UW2 297 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 4930572O03RikQ8C5Y0 211 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ttc19Q8CC21 365 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Rufy2Q8R4C2 606 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Shank2Q80Z38 1476 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Topaz1E5FYH1 1653 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ncoa5Q91W39 579 aaKnown RBP13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Samd1D3YXK1 519 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Slc4a1P04919 929 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Ap5z1Q3U829 807 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Tmem109Q3UBX0 243 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 BcanQ61361 883 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Stard3nlQ9DCI3 235 aa13.47□□□□□ -0.25
Vps54-202ENSMUST00000109578 Fbxl16A2RT62 479 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Myd88P22366 296 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 U2af2P26369 475 aaKnown RBP13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 AidaQ8C4Q6 305 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Krt25Q8VCW2 446 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Hps3Q91VB4 1002 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 BrapQ99MP8 591 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Cwc25Q9DBF7 416 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Bcl9Q9D219 1425 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Shisa4Q8CA71 197 aa13.46□□□□□ -0.25
Vps54-202ENSMUST00000109578 Usp42B2RQC2 1324 aaKnown RBP13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Clec11aO88200 328 aa13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Zfp91Q62511 572 aa13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Dnaaf2Q8BPI1 814 aa13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Eif3bQ8JZQ9 803 aaKnown RBP13.46□□□□□ -0.26
Vps54-202ENSMUST00000109578 Kcnk13Q8R1P5 405 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms