RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Ctdp1Q7TSG2 960 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 RpgrQ9R0X5 1001 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Zmym4A2A791 1549 aaKnown RBP12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gm3409A0A0G2JE67 319 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ranbp1P34022 203 aaKnown RBP12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ppp4r3aQ6P2K6 820 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Epb41l3Q9WV92 929 aa12.12□□□□□ -0.47
Vcan-202ENSMUST00000109544 Myo1bP46735 1107 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 SbdsP70122 250 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 FerP70451 823 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Agbl1Q09M05 972 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Esyt1Q3U7R1 1092 aaKnown RBP12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 EsrrbQ61539 433 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Nap1l4Q78ZA7 375 aaKnown RBP12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Amotl1Q9D4H4 968 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cwc25Q9DBF7 416 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gm1993A6X8I0 212 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 SlxD3Z347 212 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Epb41l2O70318 988 aaKnown RBP12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Nkx1-2P42580 305 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Asic1Q6NXK8 526 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Smarcc2Q6PDG5 1213 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Atp2a1Q8R429 994 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 PpanQ91YU8 470 aaKnown RBP12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Mis12Q9CY25 206 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tbc1d7Q9D0K0 293 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Zkscan5Q9Z1D8 819 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Rbm8a2A0A0N4SUH6 174 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ppp1r21Q3TDD9 780 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 GlmnQ8BZM1 596 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ddx54Q8K4L0 874 aaKnown RBP12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Rbm8aQ9CWZ3 174 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Zbtb43Q9DAI4 467 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 RalgapbQ8BQZ4 1484 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Stim2P83093 746 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Igbp1Q61249 340 aa12.11□□□□□ -0.47
Vcan-202ENSMUST00000109544 Capn2O08529 700 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Akr1b8P45377 316 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Slc5a1Q8C3K6 665 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ssx2ipQ8VC66 615 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Msantd4Q91YU3 345 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Rdm1Q9CQK3 281 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 NapgQ9CWZ7 312 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cep83Q9D5R3 692 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Slc1a4O35874 532 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 VimP20152 466 aaKnown RBP12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Eef1dP57776 281 aaKnown RBP12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Sun3Q5SS91 320 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ift122Q6NWV3 1182 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gbp9Q8BTS3 619 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Fgd6Q69ZL1 1399 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 SsbP32067 415 aaKnown RBP12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cep128Q8BI22 1102 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Naip2Q9QUK4 1447 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Heatr4E9Q357 955 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Diaph2O70566 1098 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cct6bQ61390 531 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 BrapQ99MP8 591 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tex19.1Q99MV2 351 aa12.1□□□□□ -0.47
Vcan-202ENSMUST00000109544 Apol10bG3X9K7 334 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cpsf2O35218 782 aaKnown RBP12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 MycnP03966 462 aaKnown RBP12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Psmc4P54775 418 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Clcn1Q64347 994 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ublcp1Q8BGR9 318 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ndufab1Q9CR21 156 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Vgll3P85442 326 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ano1Q8BHY3 960 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tshz3Q8CGV9 1081 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Atxn3Q9CVD2 355 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Gnat2P50149 354 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Cyp4f39Q8BGU0 532 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Pnpla2Q8BJ56 486 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 ParvgQ9ERD8 331 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Trim27Q62158 513 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ranbp6Q8BIV3 1105 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 GphnQ8BUV3 769 aaKnown RBP12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Tmx3Q8BXZ1 456 aa12.09□□□□□ -0.47
Vcan-202ENSMUST00000109544 Bfsp1A2AMT1 669 aa12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Pdia3P27773 505 aaKnown RBP12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Psmd1Q3TXS7 953 aa12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Ift20Q61025 132 aa12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Map3k2Q61083 619 aa12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Nop56Q9D6Z1 580 aaKnown RBP12.08□□□□□ -0.47
Vcan-202ENSMUST00000109544 Brd1E9PZ26 1189 aaKnown RBP12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Stx8O88983 236 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Rpl13P47963 211 aaKnown RBP12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Depdc1bQ8BH88 529 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 MarcksP26645 309 aaKnown RBP12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Taok1Q5F2E8 1001 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Asic3Q6X1Y6 530 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Cnot6lQ8VEG6 555 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Rbbp8nlA2ABX0 614 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Lekr1B2RVN1 116 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Tcerg1lQ3B807 590 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Trim6Q8BGE7 488 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Frat2Q8K025 231 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Duox2A2AQ99 1517 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Atf7ipQ7TT18 1306 aa12.08□□□□□ -0.48
Vcan-202ENSMUST00000109544 Kif17Q99PW8 1038 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms