RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Nlrp9aQ66X03 949 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Asap2Q7SIG6 958 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ptcd1Q8C2E4 695 aaKnown RBP12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 ErfeQ6PGN1 340 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ankrd31A0A140LI88 1765 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Il15P48346 162 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Fhdc1Q3ULZ2 1149 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Slc51aQ8R000 340 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Cd248Q91V98 765 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Mtfr1lQ9CWE0 289 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Pdia3P27773 505 aaKnown RBP12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 B4galnt4Q766D5 1034 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Usp21Q9QZL6 566 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Cyp2ab1S4R196 498 aa12.04□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Duox1A2AQ92 1551 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Sept1P42209 366 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 ArsiQ32KI9 573 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 TrhQ62361 256 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Letm1Q9Z2I0 738 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ythdc1E9Q5K9 736 aaKnown RBP12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Unc5clQ6R653 518 aa12.03□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Aknad1E9Q8N6 675 aa12.02□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Gm4340L7N2C4 268 aa12.02□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Fam102bQ8BQS4 339 aa12.02□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 AtrnQ9WU60 1428 aa12.02□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Fam83bQ0VBM2 1012 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ift57Q8BXG3 429 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ciapin1Q8WTY4 309 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Mapkapk5O54992 473 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Terf1P70371 421 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Pde3bQ61409 1100 aa12.02□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Kifc2O08672 792 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Plekhf1Q3TB82 279 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ppp1r21Q3TDD9 780 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Rhot2Q8JZN7 620 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 NsmfQ99NF2 532 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 EvplQ9D952 2035 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Arap2Q8BZ05 1703 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Fam160b2Q80YR2 744 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 CenppQ9CZ92 286 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Pus3Q9JI38 481 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Col22a1E9Q7P1 1613 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Kif13bA0A286YCV9 1847 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ubxn2bQ0KL01 331 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 NpeppsQ11011 920 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 SfswapQ3USH5 945 aaKnown RBP12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Pla2g4fQ50L41 855 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Mctp2Q5RJH2 878 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Atp2b4Q6Q477 1205 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Sept9Q80UG5 583 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Znrd1-asQ8R0E5 213 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Riok1Q922Q2 567 aa12.01□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Lmnb1P14733 588 aaKnown RBP12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Gpr101Q80T62 511 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Pdzph1Q8BGR1 1238 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Taf1dQ9D4V4 322 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Mdm2P23804 489 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Washc4Q3UMB9 1173 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Lmod1Q8BVA4 595 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Kcnn1Q9EQR3 537 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Slfn1Q9Z0I7 337 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Olfr247E9PVJ7 320 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Olfr819K7N727 320 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Stk11ipQ3TAA7 1072 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Hirip3Q8BLH7 601 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ttc5Q99LG4 440 aa12□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Izumo3A6PWV3 263 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Rassf8Q8CJ96 419 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Lmbrd2Q8C561 694 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Tshz3Q8CGV9 1081 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 RarsQ9D0I9 660 aaKnown RBP11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Tbc1d7Q9D0K0 293 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Magea6O89010 325 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Magea3Q6T340 320 aa11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Mrpl12Q9DB15 201 aaKnown RBP11.99□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Klrk1O54709 232 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Csrnp1P59054 583 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 EgfrQ01279 1210 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ddx11Q6AXC6 880 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ppp6r3Q922D4 844 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Tfip11Q9ERA6 838 aaKnown RBP11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Nphp3Q7TNH6 1325 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Rad23bP54728 416 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Nucb1Q02819 459 aaKnown RBP11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 UvssaQ9D479 717 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Myoz2Q9JJW5 264 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Dhx16G3X8X0 1044 aaKnown RBP11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Prl7d1P04769 244 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 En2P09066 324 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Prl3d1P18121 224 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Rdm1Q9CQK3 281 aa11.98□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Cfap70D3YVL2 1141 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Jakmip1Q8BVL9 626 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Tango6Q8C3S2 1079 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 WaslQ91YD9 501 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Sh3bp5lQ99LH9 392 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Kcnq5Q9JK45 933 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Setdb1O88974 1307 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Slc7a3P70423 618 aa11.97□□□□□ -0.49
Ccdc38-201ENSMUST00000092215 Ppip5k2Q6ZQB6 1129 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms