RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Sem1P60897 70 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 GpkowQ56A08 488 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ankrd50F7BE84 1390 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 VimP20152 466 aaKnown RBP16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Irx1P81068 480 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Trerf1Q8BXJ2 1205 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Sept3Q9Z1S5 350 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Apol7cQ8C6E1 369 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Pkd2l2Q9JLG4 621 aa16.6■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Tbc1d8bA3KGB4 1114 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Nbr1P97432 988 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Igsf3Q6ZQA6 1194 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ccdc6D3YZP9 469 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ttc19Q8CC21 365 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ak2Q9WTP6 239 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Fbln2P37889 1221 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Ssh2Q5SW75 1423 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Eif4g1Q6NZJ6 1600 aaKnown RBP16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Vamp4O70480 141 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Q8BZJ8 459 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Pola1P33609 1465 aa16.59■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Nfxl1E9Q8I7 918 aaKnown RBP16.58■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Epb41l2O70318 988 aaKnown RBP16.58■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Echdc1Q9D9V3 322 aa16.58■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Lztfl1Q9JHQ5 299 aa16.58■□□□□ 0.25
Pcdha1-201ENSMUST00000070797 Dnm1P39053 867 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Slc8a1P70414 970 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ccdc122Q8BVN0 290 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ccdc91Q9D8L5 442 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ripk4Q9ERK0 786 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 ChmQ9QXG2 665 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Fam186bD3Z420 943 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 SsbP32067 415 aaKnown RBP16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Lrrc8aQ80WG5 810 aa16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Smg7Q5RJH6 1138 aaKnown RBP16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Thoc2B1AZI6 1594 aaKnown RBP16.58■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 InsrP15208 1372 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Hoxb7P09024 217 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Capza3P70190 299 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Traf3ip3Q8C0G2 513 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Vps16Q920Q4 839 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Atp6v0a4Q920R6 833 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Plb1Q3TTY0 1478 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Atp7aQ64430 1491 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Eva1cP58659 440 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 B4galnt4Q766D5 1034 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ssrp1Q08943 708 aaKnown RBP16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ift20Q61025 132 aa16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Etf1Q8BWY3 437 aaKnown RBP16.57■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Hmgb1P63158 215 aaKnown RBP16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ppp2r3dQ9Z176 491 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ubash3aQ3V3E1 624 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Leo1Q5XJE5 667 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tshz2Q68FE9 1030 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 TkfcQ8VC30 578 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Wdr7Q920I9 1489 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Prm3Q62100 101 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Cep19Q9CQA8 163 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tacc3Q9JJ11 631 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Acot9Q9R0X4 439 aaKnown RBP16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Igbp1Q61249 340 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ift122Q6NWV3 1182 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Hs2st1Q8R3H7 356 aa16.56■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 MpndQ3TV65 487 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Irf9Q61179 399 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Actn3O88990 900 aaKnown RBP16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Lig3P97386 1015 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Map3k9Q3U1V8 1077 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Nek11Q8C0Q4 628 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Xpo4Q9ESJ0 1151 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Zranb3Q6NZP1 1069 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Bicdl2Q8CHW5 507 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tceanc2Q8R2M0 207 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Homer1Q9Z2Y3 366 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Haus1Q8BHX1 278 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Golim4Q8BXA1 655 aa16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Rbm42Q91V81 474 aaKnown RBP16.55■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Kmt5bQ3U8K7 883 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Exoc1Q8R3S6 894 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ctnnbl1Q9CWL8 563 aaKnown RBP16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Kdm3aQ6PCM1 1323 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Tnni2P13412 182 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Nxf2Q4ZGD8 691 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Bicd1Q8BR07 835 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Rps6kb1Q8BSK8 525 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ccdc14Q8K2J4 934 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Irf5P56477 497 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 EnahQ03173 802 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Kiaa1211Q5PR69 1207 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Gngt1Q61012 74 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Prpf40aQ9R1C7 953 aaKnown RBP16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Cacna2d3Q9Z1L5 1091 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Rbbp8nlA2ABX0 614 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Gm28047Q3US59 414 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ccdc82Q6PG04 518 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Peg3Q3URU2 1571 aa16.54■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Nsd3Q6P2L6 1439 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Q4VA45 678 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Ess2O70279 479 aa16.53■□□□□ 0.24
Pcdha1-201ENSMUST00000070797 Gnat3Q3V3I2 354 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms