RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 A2mQ6GQT1 1474 aa14.02□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ppp1r21Q3TDD9 780 aa14.02□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Atad3Q925I1 591 aa14.02□□□□□ -0.16
Vcpip1-201ENSMUST00000057438 Ankrd44B2RXR6 993 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Atp6v0a2P15920 856 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ltv1Q6NSQ7 470 aaKnown RBP14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Triml1Q8BVP1 470 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 RalgapbQ8BQZ4 1484 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ddx54Q8K4L0 874 aaKnown RBP14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Chd1lQ9CXF7 900 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Eps15P42567 897 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Q9D5Q8 446 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Usp5P56399 858 aaKnown RBP14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Snx13Q6PHS6 957 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Fam50bQ9WTJ8 334 aa14.02□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Dennd3A2RT67 1274 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 SbdsP70122 250 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Dmrt2Q8BG36 561 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 U2af1l4Q8BGJ9 220 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Adcy3Q8VHH7 1145 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 CenppQ9CZ92 286 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 RpgrQ9R0X5 1001 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cdr2P97817 455 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc162pQ0VG85 912 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Smarcc2Q6PDG5 1213 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Hirip3Q8BLH7 601 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Naa25Q8BWZ3 972 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Mis12Q9CY25 206 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Grpel1Q99LP6 217 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Apol10bG3X9K7 334 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 PrphP15331 475 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Igbp1Q61249 340 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Tbc1d31Q6NXY1 996 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ctdp1Q7TSG2 960 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cep83Q9D5R3 692 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ublcp1Q8BGR9 318 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Tmod2Q9JKK7 351 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Nop56Q9D6Z1 580 aaKnown RBP14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Irx4Q9QY61 515 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Fam135bQ9DAI6 1403 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Calm1P0DP26 149 aaKnown RBP14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Calm2P0DP27 149 aaKnown RBP14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Calm3P0DP28 149 aaKnown RBP14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Atxn3Q9CVD2 355 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Echdc1Q9D9V3 322 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Il1rapl2Q9ERS6 686 aa14.01□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc157Q5SPX1 718 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Kiaa1328Q6NZK5 612 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Soga3Q6NZL0 945 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ppp4r3aQ6P2K6 820 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cyp4f39Q8BGU0 532 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gtpbp10Q8K013 366 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gnat2P50149 354 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Skap1Q3UUV5 355 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc14Q8K2J4 934 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gm1993A6X8I0 212 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 SlxD3Z347 212 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Stim2P83093 746 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Zkscan4Q5SZT6 480 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Krt25Q8VCW2 446 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 JmyQ9QXM1 983 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Mug1P28665 1476 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Taok1Q5F2E8 1001 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ints8Q80V86 995 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Nol11Q8BJW5 723 aaKnown RBP14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Atp2a1Q8R429 994 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Msantd4Q91YU3 345 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Sptlc2P97363 560 aaKnown RBP14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Klc3Q91W40 508 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Fgd6Q69ZL1 1399 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Map3k2Q61083 619 aa14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Sec63Q8VHE0 760 aaKnown RBP14□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Q3UPC7 1272 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Unc13aQ4KUS2 1712 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gm10093D3YYI8 482 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Heatr4E9Q357 955 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Hdac1O09106 482 aaKnown RBP13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Asic1Q6NXK8 526 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Maip1Q8BHE8 291 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Slx4Q6P1D7 1565 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Arl1P61211 181 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Sun3Q5SS91 320 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Fam160b2Q80YR2 744 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Kif17Q99PW8 1038 aa13.99□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Eef1dP57776 281 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Synpo2Q91YE8 1087 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Amotl1Q9D4H4 968 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc124Q9D8X2 217 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Atp1a4Q9WV27 1032 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Tldc2A2ACG1 198 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 TrdnE9Q9K5 693 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Myo1bP46735 1107 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Asic3Q6X1Y6 530 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Zswim4Q8C7B8 1101 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Plcb1Q9Z1B3 1216 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Pik3c2gO70167 1506 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Epb41l2O70318 988 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Stx8O88983 236 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gbp9Q8BTS3 619 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ankrd40Q5SUE8 363 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms