RNA–Protein interactions for RNA: ENSMUST00000057254.5

Ubqln3-201, Transcript of Ubiquilin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubqln3, Length 2,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3-201ENSMUST00000057254 Usp48Q3V0C5 1052 aa10.58□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Edrf1Q6GQV7 1239 aa10.58□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Tmx3Q8BXZ1 456 aa10.58□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Cfap44E9Q5M6 1843 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Ctdnep1Q3TP92 244 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Map10Q8BJS7 891 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Tmem266Q8BZB3 538 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Naa30Q8CES0 364 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 SnrkQ8VDU5 748 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Smc3Q9CW03 1217 aaKnown RBP10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 C4bP01029 1738 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Cyp3a57D3YYZ0 503 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Trim34bJ3QNR8 485 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Fkbp1aP26883 108 aaKnown RBP10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Hspd1P63038 573 aaKnown RBP10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Hand2Q61039 217 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Usp44Q8C2S0 711 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Tktl2Q9D4D4 627 aa10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 PhaxQ9JJT9 385 aaKnown RBP10.57□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 4931408C20RikE9PWP9 1381 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Znfx1Q8R151 1909 aaKnown RBP10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Irgm2A0A140LIF8 407 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Gm13023A2A8N2 498 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Cyp2d34L7N463 504 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Cyp2d9P11714 504 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Smarcc1P97496 1104 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Trim34aQ99PP6 485 aa10.56□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Atp8a2P98200 1148 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Rnf20Q5DTM8 973 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Slc38a10Q5I012 1090 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Ccdc9Q8VC31 543 aaKnown RBP10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Erc1Q99MI1 1120 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 NgdnQ9DB96 315 aaKnown RBP10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Stx6Q9JKK1 255 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Npc1l1Q6T3U4 1333 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Pde8bE9Q4S1 865 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 FosbP13346 338 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Snai1Q02085 264 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Plekhf1Q3TB82 279 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Nyap1Q6PFX7 833 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Srp68Q8BMA6 625 aaKnown RBP10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Ccdc158Q8CDI6 1109 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Rdm1Q9CQK3 281 aa10.55□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Eef2kO08796 724 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 SlkO54988 1233 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Nlrp9aQ66X03 949 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Cchcr1Q8K2I2 770 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Dnttip2Q8R2M2 758 aaKnown RBP10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Mapk8ip1Q9WVI9 707 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Psma5Q9Z2U1 241 aaKnown RBP10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Mybbp1aQ7TPV4 1344 aaKnown RBP10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 CltaO08585 235 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Sept1P42209 366 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Vps33bP59016 617 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Pram1Q6BCL1 675 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Tmem67Q8BR76 992 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Slc39a11Q8BWY7 342 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 AidaQ8C4Q6 305 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Tbc1d7Q9D0K0 293 aa10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Mad1l1Q9WTX8 717 aaKnown RBP10.54□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 FanccP50652 591 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Kif20aP97329 887 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Atp1b3P97370 278 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Znf496Q5SXI5 585 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Spty2d1Q68FG3 682 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Lmod1Q8BVA4 595 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 CpvlQ9D3S9 478 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Hmg20bQ9Z104 317 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Rps6ka4Q9Z2B9 773 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Stox1B2RQL2 990 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 1700006A11RikB9EHI3 544 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Slurp2P0DP59 97 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Ccar2Q8VDP4 922 aaKnown RBP10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Kcnq5Q9JK45 933 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Zbtb22Q9Z0G7 638 aa10.53□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Scn11aQ9R053 1765 aa10.52□□□□□ -0.72
Ubqln3-201ENSMUST00000057254 Syce3B5KM66 88 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Ppfibp2O35711 882 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Pla2g4fQ50L41 855 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Zc3h12cQ5DTV4 884 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Fam170aQ66LM6 333 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Me3Q8BMF3 604 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Lrit1Q8K099 624 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Cntnap1O54991 1385 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Kdm3aQ6PCM1 1323 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 ImpactO55091 318 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Cd22P35329 862 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Cct2P80314 535 aaKnown RBP10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Ccdc66Q6NS45 935 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Acap3Q6NXL5 833 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Fam160b2Q80YR2 744 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Ift57Q8BXG3 429 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 SowahdQ8BY98 327 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Ppil4Q9CXG3 492 aaKnown RBP10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Lgr5Q9Z1P4 907 aa10.52□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Usp42B2RQC2 1324 aaKnown RBP10.51□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Snrpa1P57784 255 aaKnown RBP10.51□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Ufl1Q8CCJ3 793 aaKnown RBP10.51□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Dbndd1Q9CZ00 160 aa10.51□□□□□ -0.73
Ubqln3-201ENSMUST00000057254 Myh3P13541 1940 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms