RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Efcab2Q9CQ46 164 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Aox4Q3TYQ9 1336 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Klhl34A2AI76 644 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Sult6b1P0CC03 303 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Gnat3Q3V3I2 354 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Atg9aQ68FE2 551 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Fam13bQ8K2H3 851 aa17.09■□□□□ 0.33
Msx3-201ENSMUST00000055353 Syde2E9PUP1 1314 aa17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Tbc1d4Q8BYJ6 1307 aa17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Cspp1B2RX88 1205 aa17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Nop14Q8R3N1 860 aaKnown RBP17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Nlrp3Q8R4B8 1033 aa17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Tlcd1Q99JT6 247 aa17.08■□□□□ 0.33
Msx3-201ENSMUST00000055353 Tns2Q8CGB6 1400 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Kcnq3Q8K3F6 873 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Bmp2kQ91Z96 1138 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Chmp3Q9CQ10 224 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Syt10Q9R0N4 523 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Lmtk3Q5XJV6 1424 aa17.08■□□□□ 0.32
Msx3-201ENSMUST00000055353 Shank2Q80Z38 1476 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Lekr1B2RVN1 116 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Cbx1P83917 185 aaKnown RBP17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Atp2b3Q0VF55 1220 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Limch1Q3UH68 1057 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Trim56Q80VI1 734 aaKnown RBP17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Cfap58B2RW38 873 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Trim30aP15533 496 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Smarcc2Q6PDG5 1213 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ccz1Q8C1Y8 480 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Irx4Q9QY61 515 aa17.07■□□□□ 0.32
Msx3-201ENSMUST00000055353 Rgs9O54828 675 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Igflr1Q3U4N7 345 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 ZyxQ62523 564 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Dusp10Q9ESS0 483 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Pms1Q8K119 917 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ccdc94Q9D6J3 314 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ifi35Q9D8C4 286 aa17.06■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm21663A0A0G2JE01 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm7361D3Z6R1 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Card6E9PWH2 1175 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 5031410I06RikE9Q4E0 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm1979E9QAN3 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm5862K7N5V5 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm10220K7N660 267 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Hspd1P63038 573 aaKnown RBP17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Hand2Q61039 217 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Fsd1Q7TPM6 496 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Frmd3Q8BHD4 595 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Snw1Q9CSN1 536 aaKnown RBP17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Osbpl5Q9ER64 874 aa17.05■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm21985Q6P6P5 1106 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Zfp251Q6PCX8 632 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ddx58Q6Q899 926 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 RgmbQ7TQ33 436 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Sass6Q80UK7 654 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 R3hcc1Q8BSI6 488 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Shisa4Q8CA71 197 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Alg3Q8K2A8 438 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Hnrnpul1Q8VDM6 859 aaKnown RBP17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Bcl9Q9D219 1425 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Prl3d3A0A0M6L0J6 224 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Exosc10P56960 887 aaKnown RBP17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 NfkbibQ60778 359 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ankle2Q6P1H6 964 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Zbtb40Q6PCS8 1258 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Golph3lQ8R088 285 aaKnown RBP17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Tmc2Q8R4P4 888 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Mrpl44Q9CY73 333 aaKnown RBP17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Speer4bQ9D9F7 267 aa17.04■□□□□ 0.32
Msx3-201ENSMUST00000055353 Lmod3E9QA62 571 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Atp2b1G5E829 1220 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Cdk4P30285 303 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ap5z1Q3U829 807 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Hook1Q8BIL5 728 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Erc1Q99MI1 1120 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ltb4r2Q9JJL9 360 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Hmgn5Q9JL35 406 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 IncenpQ9WU62 880 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Gm973E9Q295 1059 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Tmem109Q3UBX0 243 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Kiaa1211Q5PR69 1207 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Ccdc82Q6PG04 518 aa17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Pes1Q9EQ61 584 aaKnown RBP17.03■□□□□ 0.32
Msx3-201ENSMUST00000055353 Fbxl16A2RT62 479 aa17.02■□□□□ 0.32
Msx3-201ENSMUST00000055353 Nlrp1aQ2LKU9 1182 aa17.02■□□□□ 0.32
Msx3-201ENSMUST00000055353 Tubb6Q922F4 447 aa17.02■□□□□ 0.32
Msx3-201ENSMUST00000055353 Tnks1bp1P58871 1720 aa17.02■□□□□ 0.32
Msx3-201ENSMUST00000055353 Slc4a1P04919 929 aa17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Tpm3P21107 285 aaKnown RBP17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 U2af2P26369 475 aaKnown RBP17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Spty2d1Q68FG3 682 aa17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Slc5a1Q8C3K6 665 aa17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Mtmr3Q8K296 1196 aa17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Hps3Q91VB4 1002 aa17.02■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ccdc112A0AUP1 442 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 TrdnE9Q9K5 693 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Card10P58660 1021 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Adam1aQ60813 791 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Tmem67Q8BR76 992 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ncoa5Q91W39 579 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms