RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 ParvgQ9ERD8 331 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Uhrf1bp1lA2RSJ4 1457 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ccdc186Q8C9S4 917 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Duxf3A0A0N4SV92 674 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Usp35M0QWN7 1009 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Trim11Q99PQ2 467 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Tubb5P99024 444 aaKnown RBP11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ankrd24Q80VM7 985 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 RalylQ8BTF8 293 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Rdm1Q9CQK3 281 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ppp1r21Q3TDD9 780 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Zc3h13E9Q784 1729 aaKnown RBP11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Kif5bQ61768 963 aa11.24□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Vgll3P85442 326 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Rcan3Q9JKK0 239 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Skor2A7M7C7 1008 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Rfc1P35601 1131 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Zap70P43404 618 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Nucb2P81117 420 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Vps37cQ8R105 352 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Calml4Q91WQ9 153 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Lmbr1lQ9D1E5 489 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Xrn1P97789 1719 aaKnown RBP11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 SympkQ80X82 1284 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Golim4Q8BXA1 655 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Gbp7Q91Z40 638 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Fam83gQ5SWY7 812 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 DonsonQ9QXP4 560 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Knop1Q9Z2Q2 478 aaKnown RBP11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Med14A2ABV5 1459 aaKnown RBP11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ces1aE9PYP1 563 aa11.23□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Cpsf2O35218 782 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Snw1Q9CSN1 536 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 LlphQ9D945 130 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Phkg2Q9DB30 406 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Tns3Q5SSZ5 1440 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Adamts7Q68SA9 1657 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Dync1i1O88485 628 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Traf3ip1Q149C2 625 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Vps37dQ810I0 261 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ier5O89113 308 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Tacc1Q6Y685 774 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 AU022751B1B0V2 589 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Brd1E9PZ26 1189 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Eif2aQ8BJW6 581 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Mcm3P25206 812 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Idi1P58044 227 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Cnnm2Q3TWN3 875 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Cep135Q6P5D4 1140 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Samm50Q8BGH2 469 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Nup133Q8R0G9 1155 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Limch1Q3UH68 1057 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Tsg101Q61187 391 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ccdc172Q810N9 267 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Mrps27Q8BK72 415 aaKnown RBP11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Pof1bQ8K4L4 587 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Stxbp4Q9WV89 557 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Slc14a2Q8R4T9 930 aa11.22□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ercc3P49135 783 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Gnat2P50149 354 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 VeztQ3ZK22 780 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Bms1Q6PGF5 1284 aaKnown RBP11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 CactinQ9CS00 772 aaKnown RBP11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Cdk5rap2Q8K389 1822 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ccdc152E9PX14 254 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Stk11ipQ3TAA7 1072 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Ccdc178Q8CDV0 866 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Bicc1Q99MQ1 977 aaKnown RBP11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 FancaQ9JL70 1439 aa11.21□□□□□ -0.61
Cspg4-201ENSMUST00000035661 Kiaa1211Q5PR69 1207 aa11.21□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Robo2Q7TPD3 1470 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Rbbp8nlA2ABX0 614 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Cbfa2t2O70374 594 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 LyarQ08288 388 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 SfswapQ3USH5 945 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Lrrc43Q3V0L5 667 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Rab3il1Q8VDV3 383 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Armc3A2AU72 881 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Sh2d4bA6X942 431 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Atp2b3Q0VF55 1220 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ppp1r9bQ6R891 817 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Rassf4Q8CB96 322 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Mrpl12Q9DB15 201 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Olr1Q9EQ09 363 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Tnip1Q9WUU8 647 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Cnksr1A2A9K7 700 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 TprnA2AI08 749 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Pus7B7ZNL8 666 aaKnown RBP11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ccdc6D3YZP9 469 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ccdc158Q8CDI6 1109 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ces1hD3Z298 562 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Il1rapl2Q9ERS6 686 aa11.2□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Stx1aO35526 288 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Mis12Q9CY25 206 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ccdc94Q9D6J3 314 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Ttc37F8VPK0 1563 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Tnni2P13412 182 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Tmem143Q8VD26 458 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Rad50P70388 1312 aa11.19□□□□□ -0.62
Cspg4-201ENSMUST00000035661 Nphp3Q7TNH6 1325 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 306.9 ms