RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Tacc2Q9JJG0 1149 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Adcy3Q8VHH7 1145 aa26.22■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Gadd45bP22339 160 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 SsbP32067 415 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Calm1P0DP26 149 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Calm2P0DP27 149 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Calm3P0DP28 149 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ccne1Q61457 408 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Tti2Q8BGV4 512 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Usp37Q8C0R0 979 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Zswim4Q8C7B8 1101 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Ccdc38Q8CDN8 563 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Cdr1E9Q0B4 517 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 PpanQ91YU8 470 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Sec62Q8BU14 398 aaKnown RBP26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Nek11Q8C0Q4 628 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Gpr161B2RPY5 545 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 NapgQ9CWZ7 312 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Amotl1Q9D4H4 968 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Efhd1Q9D4J1 240 aa26.21■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Zbtb21E9Q444 1094 aa26.2■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Clip2Q9Z0H8 1047 aa26.2■■□□□ 1.79
Sh3rf1-201ENSMUST00000034060 Frat1P70339 274 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Igbp1Q61249 340 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Plekho1Q9JIY0 408 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Haus1Q8BHX1 278 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Myo1bP46735 1107 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Cyp4f39Q8BGU0 532 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Sept14Q9DA97 430 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ndufa8Q9DCJ5 172 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Tacc3Q9JJ11 631 aa26.2■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Wdr93Q402B2 695 aa26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Egfem1Q8C088 590 aa26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Fam50bQ9WTJ8 334 aa26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Nol11Q8BJW5 723 aaKnown RBP26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Mxra7Q9CZH7 178 aa26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Epb41l2O70318 988 aaKnown RBP26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Rfc1P35601 1131 aa26.19■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Gm45015A0A140LII9 184 aa26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 L1td1Q587J6 782 aaKnown RBP26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Eif2aQ8BJW6 581 aaKnown RBP26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Jmjd4Q8BFT6 427 aa26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 AdnpQ9Z103 1108 aaKnown RBP26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Capn2O08529 700 aa26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 U2af2P26369 475 aaKnown RBP26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Dact3Q0PHV7 610 aa26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 GphnQ8BUV3 769 aaKnown RBP26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Cib2Q9Z309 187 aa26.18■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 DlatQ8BMF4 642 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Klf15Q9EPW2 415 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ces1aE9PYP1 563 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ptgs1P22437 602 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 InsrP15208 1372 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 AI481877A2ALV5 1481 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Plcd1Q8R3B1 756 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Frmpd1A2AKB4 1549 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Asic1Q6NXK8 526 aa26.17■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Wdhd1P59328 1117 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Utp18Q5SSI6 552 aaKnown RBP26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ifit2Q64112 472 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Nek5Q7TSC3 627 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Rab3il1Q8VDV3 383 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Synpo2Q91YE8 1087 aaKnown RBP26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Gdpd2Q9ESM6 539 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ak2Q9WTP6 239 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Camk4P08414 469 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Senp1P59110 640 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Cfap100Q80VN0 613 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 DymQ8CHY3 669 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 RestQ8VIG1 1082 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Gapvd1Q6PAR5 1458 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Rapgef6Q5NCJ1 1609 aa26.16■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 MarcksP26645 309 aaKnown RBP26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ppp1r21Q3TDD9 780 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ddx54Q8K4L0 874 aaKnown RBP26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 4921530L21RikQ9CQ47 274 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Zap70P43404 618 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 SncbQ91ZZ3 133 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Mis12Q9CY25 206 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Rrp1P56183 494 aaKnown RBP26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Fermt1P59113 677 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Capza3P70190 299 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 4933428M09RikQ9D3X3 192 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Znf394Q9Z1D9 521 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Ncapd2Q8K2Z4 1392 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Zkscan16A2ALW2 728 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Slc1a4O35874 532 aa26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Acot9Q9R0X4 439 aaKnown RBP26.15■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Trim6Q8BGE7 488 aa26.14■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Naa25Q8BWZ3 972 aa26.14■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Slx4Q6P1D7 1565 aa26.14■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 HellsQ60848 821 aa26.14■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Snd1Q78PY7 910 aaKnown RBP26.14■■□□□ 1.78
Sh3rf1-201ENSMUST00000034060 Znf568E9PYI1 671 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Ublcp1Q8BGR9 318 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Aox1O54754 1333 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Sall3Q62255 1320 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 Gm1993A6X8I0 212 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 SlxD3Z347 212 aa26.14■■□□□ 1.77
Sh3rf1-201ENSMUST00000034060 EsrrbQ61539 433 aa26.14■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms