RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Trim25Q61510 634 aaKnown RBP6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ncaph2Q8BSP2 607 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kif1bQ60575 1816 aaKnown RBP6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Msantd4Q91YU3 345 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Dnm1P39053 867 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Smarcc1P97496 1104 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ncoa3O09000 1398 aa6.29□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Krt15Q61414 452 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Exoc1Q8R3S6 894 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Prpf40aQ9R1C7 953 aaKnown RBP6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Trim27Q62158 513 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kdm4aQ8BW72 1064 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Mybl2P48972 704 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Sptlc2P97363 560 aaKnown RBP6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Aox1O54754 1333 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kifap3P70188 793 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Top1Q04750 767 aaKnown RBP6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Gm28047Q3US59 414 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Rnf187Q8BFX1 236 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Olfm5Q8BU90 496 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Bpifb4A2BGH0 617 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Spa17Q62252 149 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 U2af1l4Q8BGJ9 220 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Eif2ak4Q9QZ05 1648 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Diaph1O08808 1255 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Hsf2bpQ9D4G2 338 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 KdrP35918 1367 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Hfm1D3Z4R1 1434 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ncapd2Q8K2Z4 1392 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Snapc4Q8BP86 1333 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Gm1993A6X8I0 212 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 SlxD3Z347 212 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Bmp2kQ91Z96 1138 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Tnip1Q9WUU8 647 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Mast3Q3U214 1321 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Tnni2P13412 182 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Stxbp3Q60770 592 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Ankrd13dQ6PD24 605 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Yeats4Q9CR11 227 aaKnown RBP6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Six6os1Q9CTN5 574 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kdm3bQ6ZPY7 1562 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Gpr161B2RPY5 545 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Nfxl1E9Q8I7 918 aaKnown RBP6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Usp19Q3UJD6 1360 aa6.28□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Sh2d4bA6X942 431 aa6.27□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Atp2a2O55143 1044 aaKnown RBP6.27□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Sde2Q8K1J5 448 aaKnown RBP6.27□□□□□ -1.4
Vps13d-201ENSMUST00000020441 Kif17Q99PW8 1038 aa6.27□□□□□ -1.4
Vps13d-201ENSMUST00000020441 SbdsP70122 250 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Gm156Q58A37 223 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 MarcksP26645 309 aaKnown RBP6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Cdr2P97817 455 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ccdc113Q8C5T8 377 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Cnot6lQ8VEG6 555 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Prl3d3A0A0M6L0J6 224 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Usp25P57080 1055 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Cct2P80314 535 aaKnown RBP6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ncf1Q09014 390 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ccdc189Q6NZQ0 333 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Plcd3Q8K2J0 785 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Gng11P61953 73 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ccdc148Q6P5U8 527 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Hexim1Q8R409 356 aaKnown RBP6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Tnnc1P19123 161 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Specc1Q5SXY1 1067 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Paxip1Q6NZQ4 1056 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Chpf2Q3UU43 768 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Iws1Q8C1D8 766 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Smarca5Q91ZW3 1051 aaKnown RBP6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Cbfa2t2O70374 594 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Rab3il1Q8VDV3 383 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ier5O89113 308 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Syt1P46096 421 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ccdc157Q5SPX1 718 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Secisbp2lQ6A098 1086 aaKnown RBP6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Haus1Q8BHX1 278 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Sos2Q02384 1333 aa6.27□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Kdm1aQ6ZQ88 853 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Pcdhb22Q91XZ8 794 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Atxn3Q9CVD2 355 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Ccdc94Q9D6J3 314 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Map3k9Q3U1V8 1077 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 ClasrpQ8CFC7 668 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 TsksO54887 585 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Klhl30Q8C3F7 581 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Mmel1Q9JLI3 765 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Col17a1Q07563 1470 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Nphp4P59240 1425 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Prdm11A2AGX3 565 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Tyro3P55144 880 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Dzip1Q8BMD2 852 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Tbc1d7Q9D0K0 293 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Caprin2Q05A80 1031 aaKnown RBP6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Glg1Q61543 1175 aaKnown RBP6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Mcm7Q61881 719 aaKnown RBP6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 SnrkQ8VDU5 748 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Rilpl1Q9JJC6 406 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Zkscan4Q5SZT6 480 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Pm20d1Q8C165 503 aa6.26□□□□□ -1.41
Vps13d-201ENSMUST00000020441 Cep19Q9CQA8 163 aa6.26□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms