RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Limch1Q3UH68 1057 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ankle2Q6P1H6 964 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Smarcc2Q6PDG5 1213 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ddx58Q6Q899 926 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Speer4bQ9D9F7 267 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Prl3d3A0A0M6L0J6 224 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Cspp1B2RX88 1205 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Igflr1Q3U4N7 345 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Zbtb40Q6PCS8 1258 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Nlrp3Q8R4B8 1033 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tlcd1Q99JT6 247 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Rgs9O54828 675 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Hspd1P63038 573 aaKnown RBP13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 NfkbibQ60778 359 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tmc2Q8R4P4 888 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Cfap58B2RW38 873 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Nop14Q8R3N1 860 aaKnown RBP13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ltb4r2Q9JJL9 360 aa13.35□□□□□ -0.27
Vps54-201ENSMUST00000006221 Card10P58660 1021 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Hand2Q61039 217 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Kcna6Q61923 529 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Fsd1Q7TPM6 496 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ccz1Q8C1Y8 480 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Slc5a1Q8C3K6 665 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Shisa4Q8CA71 197 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Erc1Q99MI1 1120 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Syt10Q9R0N4 523 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Nlrp1aQ2LKU9 1182 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Pms1Q8K119 917 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Alg3Q8K2A8 438 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Osbpl5Q9ER64 874 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Exosc10P56960 887 aaKnown RBP13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm21985Q6P6P5 1106 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Snw1Q9CSN1 536 aaKnown RBP13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Dusp10Q9ESS0 483 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Irx4Q9QY61 515 aa13.34□□□□□ -0.27
Vps54-201ENSMUST00000006221 Lekr1B2RVN1 116 aa13.33□□□□□ -0.27
Vps54-201ENSMUST00000006221 R3hcc1Q8BSI6 488 aa13.33□□□□□ -0.27
Vps54-201ENSMUST00000006221 Fbxl16A2RT62 479 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Slc4a1P04919 929 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Morc2aQ69ZX6 1030 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 IncenpQ9WU62 880 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Trim30aP15533 496 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Adam1aQ60813 791 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Tubb6Q922F4 447 aa13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Mrpl44Q9CY73 333 aaKnown RBP13.33□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ccdc82Q6PG04 518 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Fam13bQ8K2H3 851 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Golph3lQ8R088 285 aaKnown RBP13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ifi35Q9D8C4 286 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Cdk4P30285 303 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Atp2b3Q0VF55 1220 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Tmem109Q3UBX0 243 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Hnrnpul1Q8VDM6 859 aaKnown RBP13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Tnks1bp1P58871 1720 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ppp4r3aQ6P2K6 820 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Sass6Q80UK7 654 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Hook1Q8BIL5 728 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ints5Q8CHT3 1018 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Pes1Q9EQ61 584 aaKnown RBP13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Card6E9PWH2 1175 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Atp2b1G5E829 1220 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Spty2d1Q68FG3 682 aa13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ncoa5Q91W39 579 aaKnown RBP13.32□□□□□ -0.28
Vps54-201ENSMUST00000006221 TrdnE9Q9K5 693 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Zfp251Q6PCX8 632 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Fam102bQ8BQS4 339 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Tmem67Q8BR76 992 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Hmgn5Q9JL35 406 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Cbx1P83917 185 aaKnown RBP13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 4930572O03RikQ8C5Y0 211 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Mtmr3Q8K296 1196 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Flad1Q8R123 492 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ccdc94Q9D6J3 314 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Usp42B2RQC2 1324 aaKnown RBP13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ubr2Q6WKZ8 1755 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ccdc112A0AUP1 442 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ap5z1Q3U829 807 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Trim59Q922Y2 403 aa13.31□□□□□ -0.28
Vps54-201ENSMUST00000006221 Pramel3A2AHA7 463 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Gm7903A2AWL1 463 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 AV320801A2AWL3 467 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Gm973E9Q295 1059 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Gm15023L7MUB4 467 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Frmd3Q8BHD4 595 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Trim52Q8CDV4 233 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ssfa2Q922B9 1252 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Cwc25Q9DBF7 416 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ank1Q02357 1862 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ric1Q69ZJ7 1422 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Sos2Q02384 1333 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 AK157302I3ITR1 129 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Ttc19Q8CC21 365 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Eif3bQ8JZQ9 803 aaKnown RBP13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Krt25Q8VCW2 446 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Hps3Q91VB4 1002 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 BrapQ99MP8 591 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Isca1Q9D924 129 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Vmn2r23E9PXI5 849 aa13.3□□□□□ -0.28
Vps54-201ENSMUST00000006221 Tpm3P21107 285 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms