RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Ankle2Q6P1H6 964 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Klhl10Q9D5V2 608 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Zkscan5Q9Z1D8 819 aa14.6□□□□□ -0.07
Msh6-201ENSMUST00000005503 Cep170Q6A065 1588 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Mrpl50Q8VDT9 159 aaKnown RBP14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ctdp1Q7TSG2 960 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Pik3ap1Q9EQ32 811 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ccdc191J3QQ27 883 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Samsn1P57725 372 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Q8BZJ8 459 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Cwc25Q9DBF7 416 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Xpo4Q9ESJ0 1151 aa14.59□□□□□ -0.07
Msh6-201ENSMUST00000005503 Ccdc73Q8CDM4 1066 aa14.58□□□□□ -0.07
Msh6-201ENSMUST00000005503 Tmem132aQ922P8 1018 aa14.58□□□□□ -0.07
Msh6-201ENSMUST00000005503 Lmbr1Q9JIT0 490 aa14.58□□□□□ -0.07
Msh6-201ENSMUST00000005503 Uggt2E9Q4X2 1504 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Aox1O54754 1333 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 1700113H08RikE9Q9Q5 327 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Txndc16Q7TN22 820 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Wasf1Q8R5H6 559 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 BrapQ99MP8 591 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Cyp26c1B2RXA7 518 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 HmmrQ00547 794 aaKnown RBP14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Arhgef1Q61210 920 aaKnown RBP14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Dzip1Q8BMD2 852 aa14.58□□□□□ -0.08
Msh6-201ENSMUST00000005503 Atp2b1G5E829 1220 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Eif4a1P60843 406 aaKnown RBP14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Adora1Q60612 326 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Prdm1Q60636 856 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Tbc1d31Q6NXY1 996 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Arid5bQ8BM75 1188 aaKnown RBP14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Lonp2Q9DBN5 852 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Cnksr1A2A9K7 700 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Sycp1Q62209 993 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ano2Q8CFW1 1002 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 ApobrQ8VBT6 942 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ccdc43Q9CR29 222 aaKnown RBP14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 DonsonQ9QXP4 560 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Lnx1O70263 728 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Foxp4Q9DBY0 795 aaKnown RBP14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Col4a3bpQ9EQG9 624 aa14.57□□□□□ -0.08
Msh6-201ENSMUST00000005503 Efcab6Q6P1E8 1516 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Stim1P70302 685 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Rab3gap1Q80UJ7 981 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Brd3Q8K2F0 726 aaKnown RBP14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Taf5lQ91WQ5 589 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ccdc7Q9D541 371 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Zbtb43Q9DAI4 467 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Myl10Q62082 202 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ccdc83Q9D4V3 305 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Plxnc1Q9QZC2 1574 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Diaph1O08808 1255 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Prl7d1P04769 244 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Csrnp1P59054 583 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Erich4Q3UNU4 136 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Igsf3Q6ZQA6 1194 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Kcnk13Q8R1P5 405 aa14.56□□□□□ -0.08
Msh6-201ENSMUST00000005503 Gm29094F6Q785 221 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Kif3cO35066 796 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Kif2aP28740 705 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Oxsr1Q6P9R2 527 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Bend3Q6PAL0 825 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Atp1a2Q6PIE5 1020 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Lrrc8aQ80WG5 810 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ddx54Q8K4L0 874 aaKnown RBP14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Acsbg1Q99PU5 721 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 MthfsQ9D110 203 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Atp2b3Q0VF55 1220 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Sun3Q5SS91 320 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Gtpbp4Q99ME9 634 aaKnown RBP14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Setd1aE9PYH6 1716 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Rrp1P56183 494 aaKnown RBP14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Zfp113Q8C689 439 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Zfp202Q8C879 641 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ttc27Q8CD92 847 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 Nup133Q8R0G9 1155 aa14.55□□□□□ -0.08
Msh6-201ENSMUST00000005503 1700006A11RikB9EHI3 544 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Actn3O88990 900 aaKnown RBP14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ttll12Q3UDE2 639 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 SfswapQ3USH5 945 aaKnown RBP14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 TrdnE9Q9K5 693 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Pet2A2AHY8 747 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Trak2Q6P9N8 913 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Trim34aQ99PP6 485 aa14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Add3Q9QYB5 706 aaKnown RBP14.54□□□□□ -0.08
Msh6-201ENSMUST00000005503 Tmem266Q8BZB3 538 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ccdc96Q9CR92 584 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ell2Q3UKU1 639 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Cfap69Q8BH53 942 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Pcdhb15Q91Y04 786 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Hfm1D3Z4R1 1434 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Pex1Q5BL07 1284 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Tab2Q99K90 693 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Atg3Q9CPX6 314 aa14.53□□□□□ -0.08
Msh6-201ENSMUST00000005503 Iqgap1Q9JKF1 1657 aaKnown RBP14.52□□□□□ -0.08
Msh6-201ENSMUST00000005503 Adgrl1Q80TR1 1466 aa14.52□□□□□ -0.08
Msh6-201ENSMUST00000005503 Btn2a2A4QPC6 514 aa14.52□□□□□ -0.08
Msh6-201ENSMUST00000005503 Ranbp1P34022 203 aaKnown RBP14.52□□□□□ -0.08
Msh6-201ENSMUST00000005503 CoilQ5SU73 570 aa14.52□□□□□ -0.08
Msh6-201ENSMUST00000005503 Luc7l2Q7TNC4 392 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms