RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 OVOL3O00110 214 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 SOCS2O14508 198 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 GNGT2O14610 69 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 MGRN1O60291 552 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 ATP5HO75947 161 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 PPP1R3DO95685 299 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 CST1P01037 141 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 CD8AP01732 235 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC6A6P31641 620 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF133P52736 654 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 MRPS34P82930 218 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 HSF2Q03933 536 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 PLP2Q04941 152 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 SNTB2Q13425 540 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 MESTQ5EB52 335 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 C1orf94Q6P1W5 598 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC25A47Q6Q0C1 308 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 FAM122BQ7Z309 247 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 JAZF1Q86VZ6 243 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR9Q2Q8NGE9 314 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 FGFBP3Q8TAT2 258 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 NMD3Q96D46 503 aaKnown RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 FBXO17Q96EF6 278 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 Q96MF0 132 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 ERMAPQ96PL5 475 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 CHID1Q9BWS9 393 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 CACNG6Q9BXT2 260 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR52D1Q9H346 318 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
PCDHGC3-208ENST00000622836 IQCMA0A1B0GVH7 501 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 AHCYL1O43865 530 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PTHP01270 115 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SERPINA5P05154 406 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PAX1P15863 534 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 NOS3P29474 1203 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SERPINF1P36955 418 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 ERFP50548 548 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 HMGA2P52926 109 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 FXYD6P3P58550 94 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 TSPAN31Q12999 210 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 DAG1Q14118 895 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 RFX4Q33E94 735 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PRSS57Q6UWY2 283 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 NUP37Q8NFH4 326 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR52L1Q8NGH7 329 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 CANT1Q8WVQ1 401 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SAMD8Q96LT4 415 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 SYT4Q9H2B2 425 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 POMPQ9Y244 141 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 UGT2A1Q9Y4X1 527 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 PMF1-BGLAPU3KQ54 211 aa12.11□□□□□ -0.47
PCDHGC3-208ENST00000622836 GSC2O15499 205 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC16A7O60669 478 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR4A8P0C604 315 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 MSR1P21757 451 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 THBS4P35443 961 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 GSSP48637 474 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 CENPAP49450 140 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 HGFACQ04756 655 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 RAB35Q15286 201 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 TBC1D28Q2M2D7 210 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 KRTAP1-3Q8IUG1 177 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 AQP11Q8NBQ7 271 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 OR4C15Q8NGM1 316 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 CADM1Q9BY67 442 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 C1orf198Q9H425 327 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 BARX1Q9HBU1 254 aaPredicted RBP12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
PCDHGC3-208ENST00000622836 FLNAP21333 2647 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 E2F6O75461 281 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 KHDRBS3O75525 346 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 RENP00797 406 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 GASTP01350 101 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 CCL2P13500 99 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 APEHP13798 732 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 ZNF32P17041 273 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 CCNOP22674 350 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 NR4A1P22736 598 aa12.09□□□□□ -0.47
PCDHGC3-208ENST00000622836 LAP3P28838 519 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms