RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 KLK2P20151 261 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 NME2P22392 152 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CFL1P23528 166 aaKnown RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CD40LGP29965 261 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CD97P48960 835 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ZNF133P52736 654 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 PPP5CP53041 499 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CLDN17P56750 224 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CLRN1P58418 232 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 NANOS3P60323 173 aaKnown RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 RAC3P60763 192 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 GPR85P60893 370 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 RPS11P62280 158 aaKnown RBP eCLIP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ADAM8P78325 824 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ROM1Q03395 351 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 FMODQ06828 376 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 HNRNPA0Q13151 305 aaKnown RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 MFAP5Q13361 173 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CAMK2DQ13557 499 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ALKBH1Q13686 389 aaKnown RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 INSL4Q14641 139 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SLC17A1Q14916 467 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 HIST3H3Q16695 136 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ZMAT1Q5H9K5 638 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 WIPI1Q5MNZ9 446 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ATP1A1-AS1Q5TC04 95 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 AGAP7PQ5VUJ5 663 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 LIPNQ5VXI9 398 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SLC25A25Q6KCM7 469 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 C16orf87Q6PH81 154 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 KCTD18Q6PI47 426 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 LINC00696Q6ZRV3 163 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CREB3L2Q70SY1 520 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ASCL5Q7RTU5 278 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CEACAM19Q7Z692 300 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CCDC190Q86UF4 302 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 GPAT4Q86UL3 456 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 GGNQ86UU5 652 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 VASH2Q86V25 355 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 TPRA1Q86W33 373 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 GLB1L2Q8IW92 636 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SULF2Q8IWU5 870 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 PHYHIPQ92561 330 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 AP3S1Q92572 193 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 MAP6Q96JE9 813 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ADGRG7Q96K78 797 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SFXN2Q96NB2 322 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 FOXN4Q96NZ1 517 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 WDFY2Q96P53 400 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 AGAP4Q96P64 663 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 AMELYQ99218 206 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 TTYH2Q9BSA4 534 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ABHD6Q9BV23 337 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SF3B5Q9BWJ5 86 aaKnown RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 RNF32Q9H0A6 362 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 TPK1Q9H3S4 243 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 QPCTLQ9NXS2 382 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 SLCO1C1Q9NYB5 712 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 PLA2G3Q9NZ20 509 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 B4GALT7Q9UBV7 327 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 IKZF2Q9UKS7 526 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 LHX6Q9UPM6 363 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 ZNF281Q9Y2X9 895 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 KLF13Q9Y2Y9 288 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 RTTNQ86VV8 2226 aa5.47□□□□□ -1.53
TRAPPC1-204ENST00000571947 CEP250Q9BV73 2442 aa5.46□□□□□ -1.53
TRAPPC1-204ENST00000571947 IGHV3-15A0A0B4J1V0 119 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 TRAV1-2A0A0B4J238 106 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 OR4C45A6NMZ5 311 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 NPIPA2E9PIF3 369 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 LOC110117498-PIK3R3F6TDL0 507 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 NPIPA3F8WFD2 350 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 KLRC4-KLRK1H3BQV0 150 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 EIF1AYO14602 144 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 SMAD9O15198 467 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 NKX2-8O15522 239 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 ZNF254O75437 659 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 ARL6IP5O75915 188 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 ZNF432O94892 652 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 GLSO94925 669 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 RPP14O95059 124 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 MPZL1O95297 269 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 UCHL1P09936 223 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 NR2C1P13056 603 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 CD46P15529 392 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 POU3F2P20265 443 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 ENPP1P22413 925 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 MYL9P24844 172 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 CALRP27797 417 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 LAP3P28838 519 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 TNFSF8P32971 234 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 RPS27P42677 84 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 STARP49675 285 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 MEOX1P50221 254 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 CCR9P51686 369 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 SUCLG1P53597 346 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 GFRA1P56159 465 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 CAV3P56539 151 aa5.46□□□□□ -1.54
TRAPPC1-204ENST00000571947 CLDN20P56880 219 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms