RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MS4A15Q8N5U1 240 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ZNF485Q8NCK3 441 aa4□□□□□ -1.77
SRP54-212ENST00000556992 NPEPL1Q8NDH3 523 aa4□□□□□ -1.77
SRP54-212ENST00000556992 BBS1Q8NFJ9 593 aa4□□□□□ -1.77
SRP54-212ENST00000556992 OR10H4Q8NGA5 316 aa4□□□□□ -1.77
SRP54-212ENST00000556992 OR4F15Q8NGB8 312 aa4□□□□□ -1.77
SRP54-212ENST00000556992 OR51G2Q8NGK0 314 aa4□□□□□ -1.77
SRP54-212ENST00000556992 OR2T4Q8NH00 348 aa4□□□□□ -1.77
SRP54-212ENST00000556992 OR4K13Q8NH42 304 aa4□□□□□ -1.77
SRP54-212ENST00000556992 HAVCR2Q8TDQ0 301 aa4□□□□□ -1.77
SRP54-212ENST00000556992 ELP5Q8TE02 316 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SMPDL3BQ92485 455 aa4□□□□□ -1.77
SRP54-212ENST00000556992 RPL3LQ92901 407 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 HGDQ93099 445 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TAAR8Q969N4 342 aa4□□□□□ -1.77
SRP54-212ENST00000556992 RPL36ALQ969Q0 106 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 KTI12Q96EK9 354 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 IMMP1LQ96LU5 166 aa4□□□□□ -1.77
SRP54-212ENST00000556992 KCTD7Q96MP8 289 aa4□□□□□ -1.77
SRP54-212ENST00000556992 CNN2Q99439 309 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 DDOQ99489 341 aa4□□□□□ -1.77
SRP54-212ENST00000556992 WDR77Q9BQA1 342 aaPredicted RBP4□□□□□ -1.77
SRP54-212ENST00000556992 CENPOQ9BU64 300 aa4□□□□□ -1.77
SRP54-212ENST00000556992 DDA1Q9BW61 102 aa4□□□□□ -1.77
SRP54-212ENST00000556992 QTRT1Q9BXR0 403 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 POTEKPQ9BYX7 375 aa4□□□□□ -1.77
SRP54-212ENST00000556992 NMNAT2Q9BZQ4 307 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SLIRPQ9GZT3 109 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 NXF2Q9GZY0 626 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 NUAK2Q9H093 628 aa4□□□□□ -1.77
SRP54-212ENST00000556992 PTGES2Q9H7Z7 377 aa4□□□□□ -1.77
SRP54-212ENST00000556992 APMAPQ9HDC9 416 aa4□□□□□ -1.77
SRP54-212ENST00000556992 MMP25Q9NPA2 562 aa4□□□□□ -1.77
SRP54-212ENST00000556992 EXOSC4Q9NPD3 245 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 TRIM36Q9NQ86 728 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TAS2R16Q9NYV7 291 aa4□□□□□ -1.77
SRP54-212ENST00000556992 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
SRP54-212ENST00000556992 CCDC59Q9P031 241 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 SLC45A2Q9UMX9 530 aa4□□□□□ -1.77
SRP54-212ENST00000556992 YARS2Q9Y2Z4 477 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 PTRH2Q9Y3E5 179 aaKnown RBP4□□□□□ -1.77
SRP54-212ENST00000556992 NUMA1Q14980 2115 aa4□□□□□ -1.77
SRP54-212ENST00000556992 SPTBN2O15020 2390 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PIKFYVEQ9Y2I7 2098 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MAP1BP46821 2468 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 FAM208BQ5VWN6 2430 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 A0A087WZY1 265 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 IGHV1-45A0A0A0MS14 117 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ARPC4-TTLL3A0A0A6YYG9 625 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NSG1A0A0A6YYJ2 146 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 A0A1W2PQ72 361 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 A0A1W2PQL4 384 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 LNP1A1A4G5 178 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 A6NIZ1 184 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 METTL15A6NJ78 407 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MCIDASD6RGH6 385 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZNF670-ZNF695F2Z2N8 137 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PLPP3O14495 311 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 XKRYO14609 159 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 KCNAB3O43448 404 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RNF13O43567 381 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SCO2O43819 266 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 NPIPB7O75200 414 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 STK17BO94768 372 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 GLCEO94923 617 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SNX4O95219 450 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 AHSA1O95433 338 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MT-CO3P00414 261 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RENP00797 406 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SERPINA3P01011 423 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 BGLAPP02818 100 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 CD1AP06126 327 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 HNRNPCP07910 306 aaKnown RBP eCLIP3.99□□□□□ -1.77
SRP54-212ENST00000556992 UMODP07911 640 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 HIST1H1CP16403 213 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 CELP19835 753 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 PTNP21246 168 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 SLC2A5P22732 501 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MST1P26927 711 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 CD40LGP29965 261 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 UQCRC1P31930 480 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 IDUAP35475 653 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 OPRL1P41146 370 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RPS5P46782 204 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZNF41P51814 821 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 GBX2P52951 348 aaPredicted RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 PPP5CP53041 499 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 CTXN1P60606 82 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RAP1BP61224 184 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RPS3AP61247 264 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 ACTA2P62736 377 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RAP1AP62834 184 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 RPS15P62841 145 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 ACTG2P63267 376 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 EGR4Q05215 589 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 LTBQ06643 244 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 ZP4Q12836 540 aa3.99□□□□□ -1.77
SRP54-212ENST00000556992 MRPL28Q13084 256 aaKnown RBP3.99□□□□□ -1.77
SRP54-212ENST00000556992 KRR1Q13601 381 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms