RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TRAV1-2A0A0B4J238 106 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 TRBV5-5A0A0J9YX44 114 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 IQCMA0A1B0GVH7 501 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR4C45A6NMZ5 311 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 J3QLW9 94 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GABRPO00591 440 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 LRRTM2O43300 516 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 TMEM127O75204 238 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 ZNF254O75437 659 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GATBO75879 557 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 ACTL6AO96019 429 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PLGP00747 810 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 IGHG1P01857 330 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 TACSTD2P09758 323 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 UCHL1P09936 223 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 CD46P15529 392 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 ZNF19P17023 458 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 ZNF43P17038 809 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 ENPP1P22413 925 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 LAP3P28838 519 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GTF2E2P29084 291 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 SFTPDP35247 375 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 NAA10P41227 235 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 ENTPD1P49961 510 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GBX2P52951 348 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 BIDP55957 195 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 CARD18P57730 90 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 NANOS3P60323 173 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 RPS3AP61247 264 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 LSM3P62310 102 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 LSM6P62312 80 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 DYNC1I2Q13409 638 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 MELKQ14680 651 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 RSPO4Q2I0M5 234 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 ZNF766Q5HY98 468 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 RNFT1Q5M7Z0 435 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 WIPI1Q5MNZ9 446 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 RIPPLY2Q5TAB7 128 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 LIPNQ5VXI9 398 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 RAET1LQ5VY80 246 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 LINC00696Q6ZRV3 163 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GLB1L2Q8IW92 636 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 C20orf196Q8IYI0 205 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 MFSD4AQ8N468 514 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 NOXO1Q8NFA2 376 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 FDCSPQ8NFU4 85 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR9K2Q8NGE7 335 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR6K6Q8NGW6 343 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR14L1PQ8NHC6 308 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 RNF128Q8TEB7 428 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 RNF133Q8WVZ7 376 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 GHSRQ92847 366 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 MCHR2Q969V1 340 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 CPNE4Q96A23 557 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 JSRP1Q96MG2 331 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 KCTD7Q96MP8 289 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 WDFY2Q96P53 400 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR2M2Q96R28 347 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 OR8B4Q96RC9 309 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 UCN2Q96RP3 112 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 AMELYQ99218 206 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PPIL3Q9H2H8 161 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 CCDC86Q9H6F5 360 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 TMEM185BQ9H7F4 350 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PALMDQ9NP74 551 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PAQR5Q9NXK6 330 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 B4GALT7Q9UBV7 327 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PLEKHB1Q9UF11 243 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 CDV3Q9UKY7 258 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 GSTK1Q9Y2Q3 226 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 COA3Q9Y2R0 106 aaPredicted RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 PCDHGA9Q9Y5G4 932 aaKnown RBP6.03□□□□□ -1.44
MSH5-217ENST00000494458 FLVCR1Q9Y5Y0 555 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 NCKAP5O14513 1909 aa6.03□□□□□ -1.44
MSH5-217ENST00000494458 PTPRZ1P23471 2315 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 LOC100506127A0A0U1RQW1 187 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TVP23AA6NH52 213 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ZNF724A8MTY0 619 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 FAM171A2A8MVW0 826 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 H0YC42 278 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TNFSF11O14788 317 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 MAGEB4O15481 346 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 TLX3O43711 291 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 RGS9O75916 674 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 GPANK1O95872 356 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SERPINA3P01011 423 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 OPN1LWP04000 364 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ISG15P05161 165 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 CELA3AP09093 270 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 NR2C1P13056 603 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 GDF1P27539 372 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 CFPP27918 469 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SDC2P34741 201 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 OPRL1P41146 370 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 MAGEA5P43359 124 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SERPINB10P48595 397 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 MTNR1BP49286 362 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 STARP49675 285 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms