RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 RASL10BQ96S79 203 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 TRAF4Q9BUZ4 470 aaPredicted RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 ABHD6Q9BV23 337 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 SLITRK2Q9H156 845 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 TP63Q9H3D4 680 aaPredicted RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 TCF7L1Q9HCS4 588 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF275Q9NSD4 429 aaPredicted RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 ALKBH4Q9NXW9 302 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 PPP4R1LQ9P1A2 415 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 NXT1Q9UKK6 140 aaKnown RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 FOXJ3Q9UPW0 622 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 VDAC3Q9Y277 283 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 COA3Q9Y2R0 106 aaPredicted RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
HOXC4-202ENST00000430889 CACNA1CQ13936 2221 aa12.51□□□□□ -0.41
HOXC4-202ENST00000430889 IGKV1D-43A0A0B4J1Z2 117 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 SHISA8B8ZZ34 492 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 SULT1B1O43704 296 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 TPPPO94811 219 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 UMODP07911 640 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 SPARCP09486 303 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 RAB40ALP0C0E4 278 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 IFNGR1P15260 489 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 DAP3P51398 398 aaKnown RBP12.5□□□□□ -0.41
HOXC4-202ENST00000430889 CLDN12P56749 244 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
HOXC4-202ENST00000430889 RPS15P62841 145 aaKnown RBP12.5□□□□□ -0.41
HOXC4-202ENST00000430889 HSF1Q00613 529 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 GLO1Q04760 184 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 MFGE8Q08431 387 aaPredicted RBP12.5□□□□□ -0.41
HOXC4-202ENST00000430889 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 IZUMO1Q8IYV9 350 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
HOXC4-202ENST00000430889 OR52N5Q8NH56 324 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 SLC22A8Q8TCC7 542 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 ITFG2Q969R8 447 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 PMEPA1Q969W9 287 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 TMEM106AQ96A25 262 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 MIB2Q96AX9 1013 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 ZFP3Q96NJ6 502 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 KLRF1Q9NZS2 232 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 B3GALT5Q9Y2C3 310 aa12.5□□□□□ -0.41
HOXC4-202ENST00000430889 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
HOXC4-202ENST00000430889 LAMTOR5O43504 91 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 MPZL1O95297 269 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 CCKBRP32239 447 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 GDNFP39905 211 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ADAM8P78325 824 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF239Q16600 458 aaKnown RBP12.49□□□□□ -0.41
HOXC4-202ENST00000430889 FAM69BQ5VUD6 431 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF248Q8NDW4 579 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 IMMP1LQ96LU5 166 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ULBP3Q9BZM4 244 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF700Q9H0M5 742 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 DPAGT1Q9H3H5 408 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 GHITMQ9H3K2 345 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 SDHAF3Q9NRP4 125 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 ITGB1BP2Q9UKP3 347 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 NUBP2Q9Y5Y2 271 aa12.49□□□□□ -0.41
HOXC4-202ENST00000430889 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
HOXC4-202ENST00000430889 IGHV1-45A0A0A0MS14 117 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 CENPXA8MT69 81 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 NPIPA5E9PKD4 350 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 AQP8O94778 261 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 CER1O95813 267 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 HRGP04196 525 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 TCRBP04435 133 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 ZNF41P51814 821 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 RAG2P55895 527 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 CD83Q01151 205 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MC2RQ01718 297 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 TLE3Q04726 772 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 FMODQ06828 376 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 C19orf57Q0VDD7 668 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MYBPHQ13203 477 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 EIF2B1Q14232 305 aaKnown RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 SF3B4Q15427 424 aaKnown RBP eCLIP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 INPP5JQ15735 1006 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
HOXC4-202ENST00000430889 KRT74Q7RTS7 529 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 DNAAF1Q8NEP3 725 aa12.48□□□□□ -0.41
HOXC4-202ENST00000430889 SYNPRQ8TBG9 265 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms