RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SELENBP1Q13228 472 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 SFTPA1Q8IWL2 248 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 CDCP1Q9H5V8 836 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 LRFN1Q9P244 771 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 SLC22A23A1A5C7 686 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 C1orf196B1AJZ1 125 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 EDN3P14138 238 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 LUMP51884 338 aaPredicted RBP14.77□□□□□ -0.04
GABRB3-215ENST00000622697 GABREP78334 506 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 RPL18Q07020 188 aaKnown RBP14.77□□□□□ -0.04
GABRB3-215ENST00000622697 CDC20Q12834 499 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 RHOUQ7L0Q8 258 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 OR56B1Q8NGI3 324 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 SPACA5Q96QH8 159 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 PTTG3PQ9NZH4 202 aa14.77□□□□□ -0.04
GABRB3-215ENST00000622697 ICOSLGO75144 302 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 DPP4P27487 766 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 S100A11P31949 105 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 DIO1P49895 249 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 RIPPLY1Q0D2K3 151 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 MPEG1Q2M385 716 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 CLVS2Q5SYC1 327 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 CAMKMTQ7Z624 323 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 GOT1L1Q8NHS2 421 aaPredicted RBP14.77□□□□□ -0.05
GABRB3-215ENST00000622697 ATF6BQ99941 703 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 WWTR1Q9GZV5 400 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 MMACHCQ9Y4U1 282 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 ACKR1Q16570 336 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 GLIPR1L1Q6UWM5 242 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 SLC22A24Q8N4F4 322 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 MRGPRX3Q96LB0 322 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 DERL3Q96Q80 235 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 METTL9Q9H1A3 318 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 KCNJ16Q9NPI9 418 aa14.77□□□□□ -0.05
GABRB3-215ENST00000622697 TIMM8BQ9Y5J9 83 aaPredicted RBP14.77□□□□□ -0.05
GABRB3-215ENST00000622697 ANKRD30BLA7E2S9 258 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 PLRG1O43660 514 aaKnown RBP14.76□□□□□ -0.05
GABRB3-215ENST00000622697 S100PP25815 95 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 KIR2DL3P43628 341 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 AFF3P51826 1226 aaKnown RBP14.76□□□□□ -0.05
GABRB3-215ENST00000622697 TPBGQ13641 420 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 DMRTC1Q5HYR2 192 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 ADGRE4PQ86SQ3 457 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 ZNF576Q9H609 170 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 PDGFAP04085 211 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 ATP1B3P54709 279 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 KIRREL2Q6UWL6 708 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 NPSR1Q6W5P4 371 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 LINC01555Q8NAE3 123 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 PRDM7Q9NQW5 492 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 GABARAPH6UMI1 98 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 GFERP55789 205 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 BTG1P62324 171 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 APH1BQ8WW43 257 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 PTDSS2Q9BVG9 487 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 MCTS1Q9ULC4 181 aaKnown RBP14.76□□□□□ -0.05
GABRB3-215ENST00000622697 SLC22A13Q9Y226 551 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 A0A0D9SG52 128 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 PCMT1P22061 227 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 TAS2R20P59543 309 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 MFAP5Q13361 173 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 HNF4GQ14541 408 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 ESCO2Q56NI9 601 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 RFPL4BQ6ZWI9 263 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 FGF20Q9NP95 211 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-215ENST00000622697 MYF5P13349 255 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 NME2P22392 152 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 IL32P24001 234 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 SDHAP31040 664 aa14.76□□□□□ -0.05
GABRB3-215ENST00000622697 SHANK3Q9BYB0 1731 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 LOC102725191A0A1B0GVB3 256 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 ICMTO60725 284 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 C14orf28Q4W4Y0 310 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 C12orf73Q69YU5 71 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 AAED1Q7RTV5 226 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 CCDC190Q86UF4 302 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 LIX1LQ8IVB5 337 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 ADGRF3Q8IZF5 1079 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 PPIL1Q9Y3C6 166 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 A0A1B0GX78 115 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 MRPL33O75394 65 aaKnown RBP14.75□□□□□ -0.05
GABRB3-215ENST00000622697 IFNA1P01562 189 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 PRKACAP17612 351 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 GABRB1P18505 474 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 MLF2Q15773 248 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-215ENST00000622697 H1FNTQ75WM6 255 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-215ENST00000622697 OR6M1Q8NGM8 313 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 KCNG3Q8TAE7 436 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 C19orf43Q9BQ61 176 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 MCOLN1Q9GZU1 580 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 VSTM5A8MXK1 200 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 K7EPK0 472 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 SSX4O60224 188 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 SOD1P00441 154 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 TAS2R46P59540 309 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 GRINAQ7Z429 371 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 FAM71E2Q8N5Q1 922 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 OR5B12Q96R08 314 aa14.75□□□□□ -0.05
GABRB3-215ENST00000622697 NKX3-1Q99801 234 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-215ENST00000622697 SPIN2AQ99865 258 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms