RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PSD2Q9BQI7 771 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 C1QTNF6Q9BXI9 259 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 MYH8P13535 1937 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 OR10J4P0C629 311 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 GABRA4P48169 554 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 GLYR1Q49A26 553 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PLPP6Q8IY26 295 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 KCNJ15Q99712 375 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 TBC1D29Q9UFV1 150 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 TEKQ02763 1124 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 AFMIDQ63HM1 303 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM43Q9BTV4 400 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PLEKHF2Q9H8W4 249 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 ISYNA1Q9NPH2 558 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 H0Y8X5 98 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 IMPA2O14732 288 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 NXPH3O95157 252 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 CLINT1Q14677 625 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PLPP7Q8NBV4 271 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 AMBRA1Q9C0C7 1298 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 SLCO5A1Q9H2Y9 848 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PROCRQ9UNN8 238 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PLPP1O14494 284 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 UBL3O95164 117 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 CRYZL1O95825 349 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TRIM23P36406 574 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 UBE2G2P60604 165 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 PMPCAQ10713 525 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 SPRED1Q7Z699 444 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 LILRA2Q8N149 483 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM217Q8N7C4 229 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 ARV1Q9H2C2 271 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 HS3ST1O14792 307 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 LCMT2O60294 686 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 CSO75390 466 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 ZNF439Q8NDP4 499 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 OR52I1Q8NGK6 324 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 OR1S2Q8NGQ3 325 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 PFN4Q8NHR9 129 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TRIB1Q96RU8 372 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 SEMA4CQ9C0C4 833 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 CHRNA9Q9UGM1 479 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 HRH3Q9Y5N1 445 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 PUS1Q9Y606 427 aaKnown RBP eCLIP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 MYH6P13533 1939 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 K7ESM1 405 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 PRKACAP17612 351 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 WDR88Q6ZMY6 472 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 DOK3Q7L591 496 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 OLIG3Q7RTU3 272 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TERB2Q8NHR7 220 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 M0QYG6 137 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TBPP20226 339 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 SMAD4Q13485 552 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM240Q5SV17 173 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 MDGA2Q7Z553 956 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 LAX1Q8IWV1 398 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 FAM109AQ8N4B1 249 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 OR51A2Q8NGJ7 313 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 RHOXF1Q8NHV9 184 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 GATA6Q92908 595 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 PRR14Q9BWN1 585 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 MYH3P11055 1940 aa16.68■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 FOLR1P15328 257 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 PPT1P50897 306 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 SUB1P53999 127 aaKnown RBP eCLIP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 ANGPTL5Q86XS5 388 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 KDM8Q8N371 416 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DRAXINQ8NBI3 349 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 OR10J5Q8NHC4 309 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MFRPQ9BY79 579 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 FOXQ1Q9C009 403 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 BCO1Q9HAY6 547 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 CHST11Q9NPF2 352 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 TAS2R16Q9NYV7 291 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MYH7P12883 1935 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 POM121CA8CG34 1229 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 VAMP5O95183 116 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 ARHGAP11BQ3KRB8 267 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 PHLDA2Q53GA4 152 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 Q96M85 177 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 ZIC5Q96T25 663 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 OR6C76A6NM76 312 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 IDSB3KWA1 339 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 TEAD1P28347 426 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 PPIAP62937 165 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 CISD2Q8N5K1 135 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 LINC01599Q8WXQ3 324 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 RPL3LQ92901 407 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms