RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 KRT84Q9NSB2 600 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 B3GNT2Q9NY97 397 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 TAS2R16Q9NYV7 291 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 UPB1Q9UBR1 384 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 B9D1Q9UPM9 204 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SLC25A15Q9Y619 301 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SETXQ7Z333 2677 aaKnown RBP9.43□□□□□ -0.9
NEDD8-205ENST00000527046 LRRK2Q5S007 2527 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 A0A096LPE4 126 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 OR5H1A6NKK0 313 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF99A8MXY4 864 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF587BE7ETH6 402 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SURF4O15260 269 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
NEDD8-205ENST00000527046 RAD51DO75771 328 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 MPZL1O95297 269 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SNAP29O95721 258 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 GPANK1O95872 356 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 IGFBP5P24593 272 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 POU1F1P28069 291 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 CLRN1P58418 232 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 NPRL3Q12980 569 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 CRMP1Q14194 572 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 LRRC36Q1X8D7 754 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 TBRG1Q3YBR2 411 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 LINC01590Q5TEZ4 76 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SLC27A4Q6P1M0 643 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 CYB561A3Q8NBI2 242 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 C1orf162Q8NEQ5 155 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 OR2T33Q8NG76 320 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 FOXB1Q99853 325 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 C9orf16Q9BUW7 83 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 ULBP2Q9BZM5 246 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 ACTR6Q9GZN1 396 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SYT4Q9H2B2 425 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 CMC2Q9NRP2 79 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 TMEM38BQ9NVV0 291 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 NPAP1Q9NZP6 1156 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 CRIM1Q9NZV1 1036 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 PLEKHB1Q9UF11 243 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-205ENST00000527046 BAIAP2Q9UQB8 552 aa9.42□□□□□ -0.9
NEDD8-205ENST00000527046 RRP15Q9Y3B9 282 aaKnown RBP9.42□□□□□ -0.9
NEDD8-205ENST00000527046 RTTNQ86VV8 2226 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 SPTAN1Q13813 2472 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 A0A1W2PPR1 153 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 DEFB108AA8MXU0 73 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 H3BN98 237 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 PRKYO43930 277 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 SLC16A7O60669 478 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TFP02787 698 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 PATE4P0C8F1 98 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 CLUP10909 449 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 PSKH1P11801 424 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 SLC2A5P22732 501 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TUBA1BP68363 451 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TUBA4AP68366 448 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 MRPS34P82930 218 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 ENDOGQ14249 297 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 KCNMB1Q16558 191 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 ZIK1Q3SY52 487 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TIMM23BQ5SRD1 257 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 LEG1Q6P5S2 330 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 UGT2A3Q6UWM9 527 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TUBA1AQ71U36 451 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 BCDIN3DQ7Z5W3 292 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 ADCK1Q86TW2 530 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 STEAP2Q8NFT2 490 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 NSMAFQ92636 917 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 KISS1RQ969F8 398 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 HRASLS5Q96KN8 279 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 FOXN4Q96NZ1 517 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 RBP7Q96R05 134 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 TOR3AQ9H497 397 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 MED20Q9H944 212 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF556Q9HAH1 456 aa9.41□□□□□ -0.9
NEDD8-205ENST00000527046 SRA1Q9HD15 236 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 HINT3Q9NQE9 182 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 MRPL22Q9NWU5 206 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 COA3Q9Y2R0 106 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 UTP20O75691 2785 aaKnown RBP9.41□□□□□ -0.9
NEDD8-205ENST00000527046 COL12A1Q99715 3063 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 ARPC4-TTLL3A0A0A6YYG9 625 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 SH3D21A4FU49 640 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 TUBAL3A6NHL2 446 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FAM183AA6NL82 134 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 FAM171A2A8MVW0 826 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 M0R129 80 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 KRT33AO76009 404 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 ATP6V1G2O95670 118 aa9.4□□□□□ -0.9
NEDD8-205ENST00000527046 MMP7P09237 267 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms