RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF891A8MT65 544 aaPredicted RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DEGS1O15121 323 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CNIH1O95406 144 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PSMB1P20618 241 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MMP11P24347 488 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PGFP49763 221 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC35A2P78381 396 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM182Q6ZP80 229 aaPredicted RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51S1Q8NGJ8 323 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 WBP2Q969T9 261 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HDAC8Q9BY41 377 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SMCO4Q9NRQ5 59 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GPR55Q9Y2T6 319 aaPredicted RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HRH3Q9Y5N1 445 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UBR2Q8IWV8 1755 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A0A0B4J203 849 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A0A0D9SG52 128 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A0A1W2PNR3 127 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 AIPO00170 330 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ICAM2P13598 275 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TPMTP51580 245 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 YPEL5P62699 121 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR1S2Q8NGQ3 325 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PTDSS2Q9BVG9 487 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GABARAPH6UMI1 98 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ALOX12BO75342 701 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GABARAPO95166 117 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EIF4EP06730 217 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UBE2MP61081 183 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RAP2BP61225 183 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DUSP2Q05923 314 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C1orf140Q5VVS0 124 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KDM4DQ6B0I6 523 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM99Q8N816 258 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NEURL3Q96EH8 262 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TBC1D29Q9UFV1 150 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LRRC37A3O60309 1634 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NUMA1Q14980 2115 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 XRCC3O43542 346 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 APOA2P02652 100 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DBPQ10586 325 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MFSD12Q6NUT3 480 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GLCCI1Q86VQ1 547 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PXT1Q8NFP0 134 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 IFI44Q8TCB0 444 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHD4Q14839 1912 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KCNK2O95069 426 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TEKQ02763 1124 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 VWA2Q5GFL6 755 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CST9Q5W186 159 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GAB3Q8WWW8 586 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UBL7Q96S82 380 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TAS2R5Q9NYW4 299 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NAGAP17050 411 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CD1CP29017 333 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RPS27P42677 84 aaKnown RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MTNR1BP49286 362 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GSK3AP49840 483 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TLE4Q04727 773 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DPPA2Q7Z7J5 298 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 BAGE3Q86Y29 109 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 BAGE2Q86Y30 109 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51E1Q8TCB6 317 aa12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM212BQ9NTI7 297 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NKX6-3A6NJ46 265 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 STMND1H3BQB6 276 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TEAD1P28347 426 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KIAA1024LP59773 190 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ARL16Q0P5N6 197 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ABHD17CQ6PCB6 329 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RHOUQ7L0Q8 258 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TERB2Q8NHR7 220 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KCNG3Q8TAE7 436 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR1E3Q8WZA6 343 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TM4SF4P48230 202 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ACTBL2Q562R1 376 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PGAP1Q75T13 922 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR4Q3Q8NH05 313 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LILRB4Q8NHJ6 448 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CCL4L1Q8NHW4 92 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC37A2Q8TED4 501 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC46A1Q96NT5 459 aa12.46□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LOXHD1Q8IVV2 1947 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms