RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 P2RY4P51582 365 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 PRPS1P60891 318 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 HNRNPA0Q13151 305 aaKnown RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 TPBGQ13641 420 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ARMC4Q5T2S8 1044 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 NXNL2Q5VZ03 156 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 PLBD1Q6P4A8 553 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 B3GLCTQ6Y288 498 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 HIST3H2AQ7L7L0 130 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 CPOQ8IVL8 374 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 TMEM99Q8N816 258 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 TM9SF4Q92544 642 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 HIST1H2ACQ93077 130 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 TMEM203Q969S6 136 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ZNF486Q96H40 463 aaPredicted RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 MED18Q9BUE0 208 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ABCB9Q9NP78 766 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 ALKBH4Q9NXW9 302 aa15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 SF3B6Q9Y3B4 125 aaKnown RBP15.53■□□□□ 0.08
PPFIA3-207ENST00000602716 A0A1W2PQ09 198 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 KLRC4-KLRK1H3BQV0 150 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 H7C1C5 153 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 TNFSF11O14788 317 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 SEC14L5O43304 696 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 HPNP05981 417 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 AHCYP23526 432 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 SUCLG1P53597 346 aaKnown RBP15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 CLDN15P56746 228 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 LCN6P62502 163 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 RPS25P62851 125 aaKnown RBP15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 PPIAP62937 165 aaKnown RBP15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 OR2G6Q5TZ20 316 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 AADACL4Q5VUY2 407 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 RSBN1Q5VWQ0 802 aaPredicted RBP15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 OR52E2Q8NGJ4 325 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 OR6F1Q8NGZ6 308 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 OR6S1Q8NH40 331 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 MIB2Q96AX9 1013 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 KCTD7Q96MP8 289 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 SRXN1Q9BYN0 137 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 TSPAN10Q9H1Z9 355 aaPredicted RBP15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 NEK6Q9HC98 313 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 CHST11Q9NPF2 352 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 TNFRSF10DQ9UBN6 386 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 B4GALT7Q9UBV7 327 aa15.52■□□□□ 0.08
PPFIA3-207ENST00000602716 CACNA1AO00555 2505 aa15.52■□□□□ 0.07
PPFIA3-207ENST00000602716 IGHV3-15A0A0B4J1V0 119 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 SNTNA6NMZ2 147 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 KDM4EB2RXH2 506 aaPredicted RBP15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MS4A18H0YCH9 400 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 RRP8O43159 456 aaKnown RBP15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 RNF13O43567 381 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 HMGN1P05114 100 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 CD14P08571 375 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MTNR1AP48039 350 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MAP2K6P52564 334 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 RAC1P63000 192 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 IFITM2Q01629 132 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MELKQ14680 651 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MS4A18Q3C1V0 323 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 MESTQ5EB52 335 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 ARHGAP11AQ6P4F7 1023 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 TMEM178AQ8NBL3 297 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 SLC37A3Q8NCC5 494 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 ANKK1Q8NFD2 765 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 OTULINQ96BN8 352 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 KLHL15Q96M94 604 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 NMNAT3Q96T66 252 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 TIGARQ9NQ88 270 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 B3GAT1Q9P2W7 334 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 EXOSC1Q9Y3B2 195 aaKnown RBP15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 CDK2AP1O14519 115 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 GYPBP06028 91 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 SF3B4Q15427 424 aaKnown RBP eCLIP15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 XKRXQ6PP77 449 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 TMPPEQ6ZT21 453 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 CXXC5Q7LFL8 322 aaKnown RBP15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 GATAD2BQ8WXI9 593 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 EXTL1Q92935 676 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 UCN2Q96RP3 112 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 PRRG3Q9BZD7 231 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 ZNF221Q9UK13 617 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 BAIAP2Q9UQB8 552 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 HDGFL3Q9Y3E1 203 aa15.51■□□□□ 0.07
PPFIA3-207ENST00000602716 URB1O60287 2271 aaKnown RBP15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 A0A1W2PQL4 384 aaPredicted RBP15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 MED19A0JLT2 244 aaPredicted RBP15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 SULT2B1O00204 365 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 ARPC3O15145 178 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 KRT8P05787 483 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 LIMS3P0CW19 117 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 LIMS4P0CW20 117 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 POU3F2P20265 443 aaPredicted RBP15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 SDC2P34741 201 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 CDKN2AP42771 156 aaKnown RBP15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 SCN1BQ07699 218 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 PUDPQ08623 228 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 ASAH1Q13510 395 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 ACKR1Q16570 336 aa15.5■□□□□ 0.07
PPFIA3-207ENST00000602716 TBR1Q16650 682 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms