RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 BORCS5Q969J3 196 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 TXNDC15Q96J42 360 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 OR2B2Q9GZK3 357 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 ST6GALNAC2Q9UJ37 374 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 CLDN25C9JDP6 229 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 CDRT1O95170 752 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 WDPCPO95876 746 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 BIDP55957 195 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 SOX8P57073 446 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 MRPL28Q13084 256 aaKnown RBP26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 ZNF846Q147U1 533 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 FAM220AQ7Z4H9 259 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 MS4A15Q8N5U1 240 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 SIGLEC12Q96PQ1 595 aa26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 NAA11Q9BSU3 229 aaPredicted RBP26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 WDR12Q9GZL7 423 aaKnown RBP26.05■■□□□ 1.76
CTDNEP1-208ENST00000573600 H3F3AP84243 136 aa26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 FOXO1Q12778 655 aa26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 LINC00696Q6ZRV3 163 aa26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 YRDCQ86U90 279 aaKnown RBP26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 CROCCP3Q8IVE0 287 aa26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 FAM83FQ8NEG4 500 aaPredicted RBP26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 AKIP1Q9NQ31 210 aa26.04■■□□□ 1.76
CTDNEP1-208ENST00000573600 A0A075B6Q4 140 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 DNPH1O43598 174 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 RFPL3SP0C7P2 107 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 ZNF43P17038 809 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 ALOX5APP20292 161 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 GDF1P27539 372 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 EGR3Q06889 387 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 CDK5R1Q15078 307 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 DPY19L4Q7Z388 723 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 GPAT4Q86UL3 456 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 SYT14Q8NB59 555 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 OR2M7Q8NG81 312 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 OTOSQ8NHW6 89 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 PGLYRP3Q96LB9 341 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 RBP7Q96R05 134 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 C6orf62Q9GZU0 229 aaPredicted RBP26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 SNTG1Q9NSN8 517 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 ACOXLQ9NUZ1 547 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 KLHL13Q9P2N7 655 aa26.03■■□□□ 1.76
CTDNEP1-208ENST00000573600 ARGFXA6NJG6 315 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 MAGEB4O15481 346 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 TRAF3IP2O43734 574 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 KHDRBS3O75525 346 aaKnown RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SULT1C4O75897 302 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 VAMP5O95183 116 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 TGM4P49221 684 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SLC3A1Q07837 685 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 RPTNQ6XPR3 784 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 TMEM91Q6ZNR0 172 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 ASCL5Q7RTU5 278 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SLC25A46Q96AG3 418 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SMIM19Q96E16 107 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 B4GALT7Q9UBV7 327 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 GRIP1Q9Y3R0 1128 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 PEX16Q9Y5Y5 336 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 PINLYPA6NC86 204 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 CD8B2A6NJW9 211 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 HSPB2A8KAH6 182 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 ZNF814B7Z6K7 855 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 TRAPPC6AO75865 159 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 GPANK1O95872 356 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 KRT8P05787 483 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 CD8BP10966 210 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 S100A5P33763 92 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 HSPB2Q16082 182 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 ATP1A1-AS1Q5TC04 95 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 AGAP7PQ5VUJ5 663 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SLC25A44Q96H78 314 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 SFXN2Q96NB2 322 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 AGAP4Q96P64 663 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 MRPL13Q9BYD1 178 aaKnown RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 DLL3Q9NYJ7 618 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 CRNNQ9UBG3 495 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 COA3Q9Y2R0 106 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 KLHDC2Q9Y2U9 406 aa26.02■■□□□ 1.76
CTDNEP1-208ENST00000573600 LINC01387J3KSC0 135 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 ZNF593O00488 134 aaPredicted RBP26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 NCKAP5O14513 1909 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 SERPINA3P01011 423 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 SDC2P34741 201 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 PTGS2P35354 604 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 ETFDHQ16134 617 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 VASH2Q86V25 355 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 OR6X1Q8NH79 312 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 ASB17Q8WXJ9 295 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 DCLRE1CQ96SD1 692 aaKnown RBP26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 MRPL22Q9NWU5 206 aaKnown RBP26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 PLA2G3Q9NZ20 509 aa26.01■■□□□ 1.75
CTDNEP1-208ENST00000573600 A0A0J9YW62 118 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 IGHG1P01857 330 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 EDNRAP25101 427 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 THEM4Q5T1C6 240 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 NEIL3Q8TAT5 605 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 FNDC8Q8TC99 324 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 GHSRQ92847 366 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 EMC6Q9BV81 110 aa26■■□□□ 1.75
CTDNEP1-208ENST00000573600 GDI2P50395 445 aaKnown RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms