RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 CRADDP78560 199 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 GFPT1Q06210 699 aaPredicted RBP-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 MAB21L1Q13394 359 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 AARDQ4LEZ3 155 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 ARL9Q6T311 187 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 KCTD9Q7L273 389 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 SERPINA12Q8IW75 414 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 HTR3CQ8WXA8 447 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 KRTAP2-4Q9BYR9 128 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 KRTAP2-1Q9BYU5 128 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 FN3KRPQ9HA64 309 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 FAM206AQ9NX38 181 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 DNAJB9Q9UBS3 223 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 AP4B1Q9Y6B7 739 aa-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 RPRD2Q5VT52 1461 aaKnown RBP-0.94□□□□□ -2.56
SNORA40-201ENST00000388090 TSPOAP1O95153 1857 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 IGHV7-4-1A0A0J9YVY3 117 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 TRDCB7Z8K6 153 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 CDS2O95674 445 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 CA1P00915 261 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 MMP7P09237 267 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 POLR2EP19388 210 aaKnown RBP-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 TCF7P36402 384 aaPredicted RBP-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 CEBPEQ15744 281 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 SLC15A2Q16348 729 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 SP6Q3SY56 376 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 DLEU7Q6UYE1 221 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 EGFL6Q8IUX8 553 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 PRSS58Q8IYP2 241 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 ATP6V0D2Q8N8Y2 350 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 OR5L2Q8NGL0 311 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 TGM7Q96PF1 710 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 SLC6A7Q99884 636 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 THUMPD3Q9BV44 507 aaKnown RBP-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 FTHL17Q9BXU8 183 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 SIRPDQ9H106 197 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 RHOJQ9H4E5 214 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 HOXC10Q9NYD6 342 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 FRMPD4Q14CM0 1322 aa-0.95□□□□□ -2.56
SNORA40-201ENST00000388090 MDC1Q14676 2089 aaKnown RBP-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 IGKV1-8A0A0C4DH67 115 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 G3V4G9 280 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 H0Y626 953 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PRAMEF26H0Y7S4 382 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 CHST10O43529 356 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 SYNGR2O43760 224 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 COX5AP20674 150 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PCMT1P22061 227 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PRDX2P32119 198 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 CYLC1P35663 651 aaPredicted RBP-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 RAD52P43351 418 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 NUMBP49757 651 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PRPSAP1Q14558 356 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 CARTPTQ16568 116 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 SMU1Q2TAY7 513 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 CFAP161Q6P656 301 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 CNIH2Q6PI25 160 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 ASCL5Q7RTU5 278 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PLA2G4DQ86XP0 818 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 STK40Q8N2I9 435 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 PIFOQ8TCI5 191 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 LKAAEAR1Q8TD35 194 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 DEPDC1BQ8WUY9 529 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 SGK3Q96BR1 496 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 OR2V2Q96R30 315 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 RUFY1Q96T51 708 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 LIPT1Q9Y234 373 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 BAZ2AQ9UIF9 1905 aaKnown RBP-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 ZFC3H1O60293 1989 aaKnown RBP-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 FANCIQ9NVI1 1328 aa-0.96□□□□□ -2.56
SNORA40-201ENST00000388090 RGS12O14924 1447 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 SPATA31E1Q6ZUB1 1445 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 COL4A2P08572 1712 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 SIGLEC16A6NMB1 481 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 LY6LH3BQJ8 138 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 RS1O15537 224 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 RAB36O95755 333 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 OPN1MWP04001 364 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 OPN1MW2P0DN77 364 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 OPN1MW3P0DN78 364 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 SSTR5P35346 364 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 ADRA1AP35348 466 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 CEACAM6P40199 344 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 MAGEA3P43357 314 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 CCNG1P51959 295 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 ZNF138P52744 262 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 ATP1B3P54709 279 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 AP1B1Q10567 949 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 TSTA3Q13630 321 aaPredicted RBP-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 MPV17L2Q567V2 206 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 SHQ1Q6PI26 577 aaKnown RBP-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 SPATA8Q6RVD6 105 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 ZNF322Q6U7Q0 402 aaPredicted RBP-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 HDDC2Q7Z4H3 204 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 TMEM17Q86X19 198 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 NANPQ8TBE9 248 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 C12orf42Q96LP6 360 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 TIMM17AQ99595 171 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 OSBPL10Q9BXB5 764 aa-0.97□□□□□ -2.56
SNORA40-201ENST00000388090 COPS7BQ9H9Q2 264 aaPredicted RBP-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms