RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 C5orf46Q6UWT4 87 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 KLHDC8BQ8IXV7 354 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 OR4K15Q8NH41 348 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 PPP1R35Q8TAP8 253 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 LOC102725191A0A1B0GVB3 256 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 OTOL1A6NHN0 477 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SOCS6O14544 535 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 FBXO24O75426 580 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CLDN2P57739 230 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 GAB1Q13480 694 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CLPPQ16740 277 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 ZMAT1Q5H9K5 638 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 FAHD1Q6P587 224 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CDCA4Q9BXL8 241 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 NMNAT2Q9BZQ4 307 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SERTAD4Q9NUC0 356 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 PURGQ9UJV8 347 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 PPP1R3CQ9UQK1 317 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 GPX5O75715 221 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 TIAL1Q01085 375 aaKnown RBP eCLIP13.38□□□□□ -0.273e-9■■■■□ 26.4
PRDM16-203ENST00000378391 LSMEM1Q8N8F7 131 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 MBD3L1Q8WWY6 194 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 MIB2Q96AX9 1013 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 UBQLN3Q9H347 655 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 TP53TG5Q9Y2B4 290 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 ZFC3H1O60293 1989 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 MYO9BQ13459 2157 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 B4E171 279 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 H0YGG7 62 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 TRAF3IP2O43734 574 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 FGF7P21781 194 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 MMP11P24347 488 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SEC61A1P61619 476 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 EXOSC6Q5RKV6 272 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 STEAP1BQ6NZ63 245 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CALHM3Q86XJ0 350 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SMIM12Q96EX1 92 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 GSX2Q9BZM3 304 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 M0R2Z0 102 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CEBPBP17676 345 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 TSFMP43897 325 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 RAB38P57729 211 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 POU3F1Q03052 451 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 LTB4RQ15722 352 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF547Q8IVP9 402 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SFXN2Q96NB2 322 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 NXF5Q9H1B4 397 aaKnown RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 PDFQ9HBH1 243 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 RAB9BQ9NP90 201 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 LYRM2Q9NU23 88 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF587BE7ETH6 402 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF593O00488 134 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-203ENST00000378391 KLKB1P03952 638 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PVRP15151 417 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-203ENST00000378391 ATP1B3P54709 279 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 ERVK-16P61578 105 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PLA2G7Q13093 441 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 VRK3Q8IV63 474 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PCNPQ8WW12 178 aaKnown RBP13.37□□□□□ -0.27
PRDM16-203ENST00000378391 OR1E3Q8WZA6 343 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 SLC41A2Q96JW4 573 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 WDR76Q9H967 626 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 NPPBP16860 134 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 TEAD1P28347 426 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 MEOX2P50222 304 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 HYAL4Q2M3T9 481 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 DPY19L2P2Q6ZN68 376 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 GDF7Q7Z4P5 450 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 MKXQ8IYA7 352 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PIGQQ9BRB3 760 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PCED1AQ9H1Q7 454 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 SMLR1H3BR10 107 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 M0R143 59 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 PAPLNO95428 1278 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 RFLNAQ6ZTI6 216 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 BADQ92934 168 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF681Q96N22 645 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 SERINC4A6NH21 518 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 HIDE1A8MVS5 230 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 ACTL6BO94805 426 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 SNCAP37840 140 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 BCDIN3DQ7Z5W3 292 aaKnown RBP13.37□□□□□ -0.27
PRDM16-203ENST00000378391 IL22RA1Q8N6P7 574 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 LMNTD1Q8N9Z9 388 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
PRDM16-203ENST00000378391 A0A1B0GWA3 101 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms