RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SPATA9Q9BWV2 254 aa4.95□□□□□ -1.62
CDC42SE2-201ENST00000360515 MRPL13Q9BYD1 178 aaKnown RBP4.95□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZCCHC3Q9NUD5 404 aaKnown RBP4.95□□□□□ -1.62
CDC42SE2-201ENST00000360515 LSM4Q9Y4Z0 139 aaKnown RBP4.95□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZC3H12DA2A288 527 aaKnown RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ENSAO43768 121 aaKnown RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 PRPS1L1P21108 318 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 TACR3P29371 465 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC6A1P30531 599 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 SELENOVP59797 346 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CAMK2DQ13557 499 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CARTPTQ16568 116 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CEACAM16Q2WEN9 425 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 KLHL36Q8N4N3 616 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 OR2T11Q8NH01 316 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ATP6V1E2Q96A05 226 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ROPN1LQ96C74 230 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NEIL1Q96FI4 390 aaPredicted RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 DCLRE1CQ96SD1 692 aaKnown RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 C1QTNF6Q9BXI9 259 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CHST2Q9Y4C5 530 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NBEAL2Q6ZNJ1 2754 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 IGKV1D-42A0A075B6H8 117 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CFAP73A6NFT4 308 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NKX6-3A6NJ46 265 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 MT-ATP6P00846 226 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 IGHV3-9P01782 118 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CHRM4P08173 479 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 HMOX2P30519 316 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZNF81P51508 661 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CLDN8P56748 225 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZMYND11Q15326 602 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 TMEM53Q6P2H8 277 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 SPATC1Q76KD6 591 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 PCYOX1LQ8NBM8 494 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 C11orf40Q8WZ69 217 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 RAB8BQ92930 207 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CCDC115Q96NT0 180 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 OR11A1Q9GZK7 315 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 TUBB1Q9H4B7 451 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 THUMPD1Q9NXG2 353 aaKnown RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CAPN7Q9Y6W3 813 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 HTR3EA5X5Y0 456 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 AP3D1O14617 1153 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 FMO6PO60774 539 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 HOXB9P17482 250 aaPredicted RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 LCN2P80188 198 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 HSPB3Q12988 150 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 PMS2P3Q13401 168 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 CEACAM7Q14002 265 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 LIN52Q52LA3 116 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NXNQ6DKJ4 435 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NIPAL3Q6P499 406 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 H1FNTQ75WM6 255 aaPredicted RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 KIRREL3Q8IZU9 778 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC22A24Q8N4F4 322 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 FAM71E2Q8N5Q1 922 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 OR4F17Q8NGA8 305 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 NABP1Q96AH0 204 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 EGLN2Q96KS0 407 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 OR4F4Q96R69 305 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 FOXB1Q99853 325 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZNF426Q9BUY5 554 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 EBPLQ9BY08 206 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 RAB18Q9NP72 206 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 HAO1Q9UJM8 370 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 EMCNQ9ULC0 261 aa4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 FAF1Q9UNN5 650 aaPredicted RBP4.94□□□□□ -1.62
CDC42SE2-201ENST00000360515 EBAG9O00559 213 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 NDUFA2O43678 99 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 FCMRO60667 390 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CRYBA1P05813 215 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZCCHC18P0CG32 403 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 NAT1P18440 290 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 MATN1P21941 496 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 GCAP28676 217 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 LSP1P33241 339 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 IDH2P48735 452 aaKnown RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 LASP1Q14847 261 aaKnown RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 MAD2L1BPQ15013 274 aaPredicted RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 DPY19L1Q2PZI1 675 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 KLHL22Q53GT1 634 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 MSANTD1Q6ZTZ1 278 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 GPR137CQ8N3F9 429 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC30A7Q8NEW0 376 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CRLF2Q9HC73 371 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLCO1B3Q9NPD5 702 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 UGT2A1Q9Y4X1 527 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 TRAV36DV7A0A075B6V5 113 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZSCAN5BA6NJL1 495 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 RAB36O95755 333 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC6A2P23975 617 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CXCR5P32302 372 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 RANBP1P43487 201 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 FOXA1P55317 472 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 MRPS34P82930 218 aaKnown RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 COX10Q12887 443 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms