RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FARSAQ9Y285 508 aaKnown RBP14.34□□□□□ -0.11
NPHP4-211ENST00000622020 CEP290O15078 2479 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 ELOA3DA6NLF2 546 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-211ENST00000622020 KCNAB3O43448 404 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 UPK3AO75631 287 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 GLSO94925 669 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-211ENST00000622020 IFNA16P05015 189 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 CPN1P15169 458 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 GRK6P43250 576 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 GRM7Q14831 915 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 RBMS2Q15434 407 aaKnown RBP14.34□□□□□ -0.11
NPHP4-211ENST00000622020 ELOA3BQ3SY89 546 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 ELOA3Q8NG57 546 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 SEC22AQ96IW7 307 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 ERVK-19Q9WJR5 959 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 SLC22A13Q9Y226 551 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 SLC6A5Q9Y345 797 aa14.34□□□□□ -0.11
NPHP4-211ENST00000622020 LINC01553A4QN01 128 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 CCSO14618 274 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 OR2A4O95047 310 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 AKR7A3O95154 331 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 APBB3O95704 486 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 CELA2BP08218 269 aaPredicted RBP14.33□□□□□ -0.11
NPHP4-211ENST00000622020 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 POU3F4P49335 361 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 OR10K2Q6IF99 312 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 LIN54Q6MZP7 749 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 ZNF627Q7L945 461 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 RAB40AQ8WXH6 277 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 BADQ92934 168 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 NKD1Q969G9 470 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 OR2A7Q96R45 310 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 MED11Q9P086 117 aa14.33□□□□□ -0.11
NPHP4-211ENST00000622020 A0A087WUJ7 227 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 MAP3K8P41279 467 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 GGTLC2Q14390 218 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 GK2Q14410 553 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-211ENST00000622020 KIR2DS3Q14952 304 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ALG10Q5BKT4 473 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 TSSK4Q6SA08 328 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 PHOSPHO1Q8TCT1 267 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 SCARB1Q8WTV0 552 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 C3orf49Q96BT1 292 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 SHARPINQ9H0F6 387 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ATG5Q9H1Y0 275 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ZNF337Q9Y3M9 751 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ITGA5P08648 1049 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 RBM34P42696 430 aaKnown RBP14.33□□□□□ -0.12
NPHP4-211ENST00000622020 AKR1C2P52895 323 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 AKR1C1Q04828 323 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 IKZF1Q13422 519 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 C1orf61Q13536 156 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 SCGB2B2Q4G0G5 96 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ARHGAP40Q5TG30 622 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 OLFML2AQ68BL7 652 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-211ENST00000622020 HDDC2Q7Z4H3 204 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 LRRTM1Q86UE6 522 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 OR1S1Q8NH92 325 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 PNPLA2Q96AD5 504 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 CCDC74AQ96AQ1 378 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 LCORQ96JN0 433 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-211ENST00000622020 KCNG2Q9UJ96 466 aa14.33□□□□□ -0.12
NPHP4-211ENST00000622020 WDFY3Q8IZQ1 3526 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 PTPRSQ13332 1948 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 SDC3O75056 442 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 HPGDP15428 266 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 GPR143P51810 404 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 ILF3Q12906 894 aaKnown RBP eCLIP14.32□□□□□ -0.124e-7■■■■□ 25.5
NPHP4-211ENST00000622020 LINC00114Q6XXX2 140 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 PDZD9Q8IXQ8 264 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 PRR22Q8IZ63 422 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 POFUT1Q9H488 388 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 EMC3Q9P0I2 261 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 BET1O15155 118 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 TACSTD2P09758 323 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 PPP3CBP16298 524 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 COL9A1P20849 921 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 S1PR1P21453 382 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 CAPZA2P47755 286 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 CD226Q15762 336 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 NKPD1Q17RQ9 610 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 ITPRIPL2Q3MIP1 535 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 TMEM196Q5HYL7 178 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 SLC36A1Q7Z2H8 476 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 ZNF550Q7Z398 422 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 ZNF227Q86WZ6 799 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 OR52H1Q8NGJ2 320 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 OR2G2Q8NGZ5 317 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 FAM174AQ8TBP5 190 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 LYRM4Q9HD34 91 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 EXOSC3Q9NQT5 275 aaKnown RBP14.32□□□□□ -0.12
NPHP4-211ENST00000622020 GRHPRQ9UBQ7 328 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 MRTO4Q9UKD2 239 aaKnown RBP14.32□□□□□ -0.12
NPHP4-211ENST00000622020 FBXL21Q9UKT6 434 aa14.32□□□□□ -0.12
NPHP4-211ENST00000622020 IGKV1D-42A0A075B6H8 117 aa14.31□□□□□ -0.12
NPHP4-211ENST00000622020 GGT3PA6NGU5 568 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms