RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SS18L1O75177 396 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-203ENST00000471658 CLUP10909 449 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 GABRB1P18505 474 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 MYF6P23409 242 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 PMPCAQ10713 525 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 MAD2L1BPQ15013 274 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-203ENST00000471658 GUSBP1Q15486 140 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 PHYHD1Q5SRE7 291 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 PLBD1Q6P4A8 553 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 TMEM123Q8N131 208 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 BBS1Q8NFJ9 593 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 CNIH3Q8TBE1 160 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 TMEM163Q8TC26 289 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 GMPPAQ96IJ6 420 aaPredicted RBP17.01■□□□□ 0.31
PSPC1-203ENST00000471658 KCNK17Q96T54 332 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 TM9SF2Q99805 663 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 MRPL13Q9BYD1 178 aaKnown RBP17.01■□□□□ 0.31
PSPC1-203ENST00000471658 C12orf49Q9H741 205 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 EMC3Q9P0I2 261 aa17.01■□□□□ 0.31
PSPC1-203ENST00000471658 SLC22A23A1A5C7 686 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 PRSS37A4D1T9 235 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 A6NIZ1 184 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 B8ZZF3 427 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 DENRO43583 198 aaKnown RBP17■□□□□ 0.31
PSPC1-203ENST00000471658 IFNGP01579 166 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 PGA4P0DJD7 388 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 PGA3P0DJD8 388 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 KIR2DL2P43627 348 aaPredicted RBP17■□□□□ 0.31
PSPC1-203ENST00000471658 RAP1BP61224 184 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 RAP1AP62834 184 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 IL18R1Q13478 541 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 TMEM201Q5SNT2 666 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 DEPDC4Q8N2C3 294 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 OR8J1Q8NGP2 316 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 APH1BQ8WW43 257 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 ZNRF4Q8WWF5 429 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF566Q969W8 418 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 TMEM45BQ96B21 275 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 ADAD1Q96M93 576 aaKnown RBP17■□□□□ 0.31
PSPC1-203ENST00000471658 SYT4Q9H2B2 425 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 SRA1Q9HD15 236 aaKnown RBP17■□□□□ 0.31
PSPC1-203ENST00000471658 UBAP1Q9NZ09 502 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 DNAJC27Q9NZQ0 273 aa17■□□□□ 0.31
PSPC1-203ENST00000471658 IGKV1D-43A0A0B4J1Z2 117 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 MRPL33O75394 65 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 UPK3AO75631 287 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 IGHV3-9P01782 118 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 GYPBP06028 91 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 ZNF3P17036 446 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 PER3P56645 1201 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 FMODQ06828 376 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 LAIR2Q6ISS4 152 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 VWA1Q6PCB0 445 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CXXC5Q7LFL8 322 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 THAP5Q7Z6K1 395 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CNEP1R1Q8N9A8 125 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 SETD9Q8NE22 299 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 LRR1Q96L50 414 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 PRRG3Q9BZD7 231 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 RPRD1BQ9NQG5 326 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 GLRX2Q9NS18 164 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CFAP46Q8IYW2 2715 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 FAM171A2A8MVW0 826 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 PRR23D1E9PI22 279 aaPredicted RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 DCTN6O00399 190 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 ENTPD6O75354 484 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 WBP4O75554 376 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 IL2RAP01589 272 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 IGHG1P01857 330 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 PRR23D2P0DMB1 279 aaPredicted RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 TMIGD3P0DMS9 266 aaPredicted RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CEACAM8P31997 349 aaPredicted RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 TIMP3P35625 211 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CA7P43166 264 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 CLRN1P58418 232 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 SNRPGP62308 76 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 ETFDHQ16134 617 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 SMN1Q16637 294 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 AADACL4Q5VUY2 407 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 FAM205BPQ63HN1 556 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 OR2A2Q6IF42 318 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 FAM214BQ7L5A3 538 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 ADCK1Q86TW2 530 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 FAM26EQ8N5C1 309 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 NOXO1Q8NFA2 376 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 OR51L1Q8NGJ5 315 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 TRUB1Q8WWH5 349 aaKnown RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 TMEM54Q969K7 222 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 NUAK2Q9H093 628 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 Q9H521 79 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 RERGLQ9H628 205 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 GP6Q9HCN6 339 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 ASB6Q9NWX5 421 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 VSX1Q9NZR4 365 aaPredicted RBP16.99■□□□□ 0.31
PSPC1-203ENST00000471658 RCE1Q9Y256 329 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 DOCK7Q96N67 2140 aa16.99■□□□□ 0.31
PSPC1-203ENST00000471658 M0R3G1 203 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 SLC43A1O75387 559 aa16.98■□□□□ 0.31
PSPC1-203ENST00000471658 TNFSF13O75888 250 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms