RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 UQCRC1P31930 480 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 APOBEC1P41238 236 aaKnown RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 SLC15A1P46059 708 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 MAP2K6P52564 334 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 FXYD6P3P58550 94 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 EGR4Q05215 589 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 PMS2P3Q13401 168 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 NEDD8Q15843 81 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 SGCBQ16585 318 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 ZNF74Q16587 644 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 KLHL22Q53GT1 634 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 SLC25A53Q5H9E4 307 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 HIST3H2AQ7L7L0 130 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 SLC46A3Q7Z3Q1 461 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 ADGRG3Q86Y34 549 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 LIX1LQ8IVB5 337 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 C10orf53Q8N6V4 93 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 C9orf106Q8NAJ2 232 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 RELL2Q8NC24 303 aaPredicted RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 SMPDL3BQ92485 455 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 HIST1H2ACQ93077 130 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 RFKQ969G6 155 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 ZNF524Q96C55 264 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 INTS12Q96CB8 462 aaKnown RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 DGCR14Q96DF8 476 aaKnown RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 LRR1Q96L50 414 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 ZNF582Q96NG8 517 aaPredicted RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 KLHDC3Q9BQ90 382 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 FKRPQ9H9S5 495 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 MCCC2Q9HCC0 563 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 AMBNQ9NP70 447 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 FANCFQ9NPI8 374 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 NANSQ9NR45 359 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 GLRX2Q9NS18 164 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 JKAMPQ9P055 326 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 H2AFY2Q9P0M6 372 aaPredicted RBP8.69□□□□□ -1.02
SYN3-201ENST00000332840 HCFC1P51610 2035 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 AKAP6Q13023 2319 aa8.69□□□□□ -1.02
SYN3-201ENST00000332840 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 TMEM72A0PK05 275 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 CCDC160A6NGH7 325 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 ZNF99A8MXY4 864 aaPredicted RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 KDM4EB2RXH2 506 aaPredicted RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 MSTNO14793 375 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 PRODHO43272 600 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 IDH3BO43837 385 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 OR2T1O43869 369 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 SYNGR4O95473 234 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 MT-ATP6P00846 226 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 IFNGP01579 166 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 BGLAPP02818 100 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 PRKCAP17252 672 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 CCNA2P20248 432 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 FKBP2P26885 142 aaKnown RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 KIR2DL3P43628 341 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 CLDN15P56746 228 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 CLDN20P56880 219 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 TLE4Q04727 773 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 EMX1Q04741 257 aaPredicted RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 ST3GAL4Q11206 333 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 FHL1Q13642 323 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 RAB39AQ14964 217 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 PON3Q15166 354 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 SYT14P1Q58G82 188 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 FOXB2Q5VYV0 432 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 GTF2IRD2BQ6EKJ0 949 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 XAF1Q6GPH4 301 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 POMZP3Q6PJE2 187 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 DPY19L2P2Q6ZN68 376 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 GTF2IRD2Q86UP8 949 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 GGNQ86UU5 652 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 OR6S1Q8NH40 331 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 FAM222BQ8WU58 562 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 FCGR1BQ92637 280 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 RORBQ92753 470 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 MUL1Q969V5 352 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 TMIGD2Q96BF3 282 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 KLHL15Q96M94 604 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 RHNO1Q9BSD3 238 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 PRRG4Q9BZD6 226 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 RNF122Q9H9V4 155 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 CMC2Q9NRP2 79 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 IL20RAQ9UHF4 553 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 KLHL21Q9UJP4 597 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 ZNF229Q9UJW7 825 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.68□□□□□ -1.02
SYN3-201ENST00000332840 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 EMC9Q9Y3B6 208 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 SPIN1Q9Y657 262 aaPredicted RBP8.68□□□□□ -1.02
SYN3-201ENST00000332840 EML6Q6ZMW3 1958 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 ACANP16112 2415 aa8.68□□□□□ -1.02
SYN3-201ENST00000332840 A0A1W2PNV4 684 aa8.67□□□□□ -1.02
SYN3-201ENST00000332840 TUBAL3A6NHL2 446 aa8.67□□□□□ -1.02
SYN3-201ENST00000332840 RIIAD1A6NNX1 92 aa8.67□□□□□ -1.02
SYN3-201ENST00000332840 LRRN3E7EW58 273 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms