RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 NPIPA3F8WFD2 350 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SEC14L5O43304 696 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TSPAN9O75954 239 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KRT36O76013 467 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 CLEC3BP05452 202 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 H1F0P07305 194 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 GAAP10253 952 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PNMTP11086 282 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 CPN1P15169 458 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ITGA2P17301 1181 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 HOXB6P17509 224 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KLK2P20151 261 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 CXCR1P25024 350 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 RRM2P31350 389 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SFTPDP35247 375 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 RBM34P42696 430 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 HMGA2P52926 109 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 IST1P53990 364 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PER3P56645 1201 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ELF3P78545 371 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 LTBQ06643 244 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ST3GAL3Q11203 375 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PPP1R8Q12972 351 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 MYBPHQ13203 477 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TRAM2Q15035 370 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SEC23BQ15437 767 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ATP6AP1Q15904 470 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM176BQ3YBM2 270 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 FBLN7Q53RD9 439 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KRTCAP3Q53RY4 240 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SYT14P1Q58G82 188 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 C1orf140Q5VVS0 124 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 OR2T5Q6IEZ7 315 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF770Q6IQ21 691 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ZFP1Q6P2D0 407 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ARHGAP11AQ6P4F7 1023 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 AAGABQ6PD74 315 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PODNL1Q6PEZ8 512 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TBPL2Q6SJ96 375 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 Q6ZPB1 254 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM179BQ7Z7N9 219 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ADGRE4PQ86SQ3 457 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 CYP4Z1Q86W10 505 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 BCL6BQ8N143 479 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KLHL36Q8N4N3 616 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ATP6V1C2Q8NEY4 427 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 OR5M9Q8NGP3 310 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 OR2T29Q8NH02 315 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 OR2V1Q8NHB1 315 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PFN4Q8NHR9 129 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SLC25A43Q8WUT9 341 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM239Q8WW34 195 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ACOT11Q8WXI4 607 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 MIB2Q96AX9 1013 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KTI12Q96EK9 354 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 DNAJA3Q96EY1 480 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 AJUBAQ96IF1 538 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF347Q96SE7 839 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 GPA33Q99795 319 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PKP2Q99959 881 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TUBA1CQ9BQE3 449 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 FNDC11Q9BVV2 318 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SRXN1Q9BYN0 137 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 POTEKPQ9BYX7 375 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 LDAHQ9H6V9 325 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 S100A14Q9HCY8 104 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 MEPEQ9NQ76 525 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SERINC1Q9NRX5 453 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 AGPAT4Q9NRZ5 378 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 PNPLA3Q9NST1 481 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 C20orf141Q9NUB4 165 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TBC1D23Q9NUY8 699 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 RPS6KB2Q9UBS0 482 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 HDGFL3Q9Y3E1 203 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM32AQ9Y421 112 aaKnown RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 AP4S1Q9Y587 144 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 AP4B1Q9Y6B7 739 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 NBASA2RRP1 2371 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 NINQ8N4C6 2090 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 TRAV36DV7A0A075B6V5 113 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 SH3PXD2BA1X283 911 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM90A18PA6NE21 464 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM90A16PA6NEW6 464 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 LIPT2A6NK58 231 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM90A9PA6NNJ1 464 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 ENO4A6NNW6 628 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM90A5PA8MXJ8 464 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 TNFRSF11BO00300 401 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 KPNA4O00629 521 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 TNFSF11O14788 317 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 BCKDKO14874 412 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 CLOCKO15516 846 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 CXCL13O43927 109 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 GADD45GO95257 159 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 AHSA1O95433 338 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 PMS2P2O95744 297 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 CST1P01037 141 aa4.63□□□□□ -1.67
HERPUD1-207ENST00000563781 LDLRP01130 860 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms