RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	SAG	P10523	405 aa	Predicted RBP	7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	PSMB1	P20618	241 aa	Known RBP	7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	COX5A	P20674	150 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	MAGEA2	P43356	314 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	LIMS1	P48059	325 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	FXYD6P3	P58550	94 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	TUBA1B	P68363	451 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	TUBA4A	P68366	448 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	CCNI	Q14094	377 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	FLOT2	Q14254	428 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	MFSD13A	Q14CX5	517 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	P2RY6	Q15077	328 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	TAB1	Q15750	504 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	STK11	Q15831	433 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	GABRA6	Q16445	453 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	ACKR1	Q16570	336 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	SEZ6L2	Q6UXD5	910 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	TMPRSS11F	Q6ZWK6	438 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	TUBA1A	Q71U36	451 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	SLC35D2	Q76EJ3	337 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	NANOGNB	Q7Z5D8	188 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	SPATA24	Q86W54	205 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	C20orf196	Q8IYI0	205 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	RNF113B	Q8IZP6	322 aa	Known RBP	7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	WDR31	Q8NA23	367 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	ADPRHL1	Q8NDY3	354 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	OR4C15	Q8NGM1	316 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	OR52N5	Q8NH56	324 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	FAM222B	Q8WU58	562 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	KISS1R	Q969F8	398 aa	Predicted RBP	7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	LRRC46	Q96FV0	321 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	LRGUK	Q96M69	825 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	DACH2	Q96NX9	599 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	MUS81	Q96NY9	551 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	MED18	Q9BUE0	208 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	SLCO5A1	Q9H2Y9	848 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	UPB1	Q9UBR1	384 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	MALT1	Q9UDY8	824 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	KCNN3	Q9UGI6	736 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	NOX1	Q9Y5S8	564 aa		7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	SPTAN1	Q13813	2472 aa	Known RBP	7.74	□□□□□ -1.17
PRKCH-222	ENST00000556778	CENPE	Q02224	2701 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	UNC79	Q9P2D8	2635 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	PTPN13	Q12923	2485 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	HEATR5A	Q86XA9	2040 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	TCRBV3S1	A0A5B6	114 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	DHRS12	A0PJE2	317 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	CIB4	A0PJX0	185 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	FAM221A	A4D161	298 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ZNF503-AS2	A6NEH8	195 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778		A6NNC1	897 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ZNF726	A6NNF4	738 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	MCIDAS	D6RGH6	385 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	TNFRSF11B	O00300	401 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	CLOCK	O15516	846 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	SLC43A1	O75387	559 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ATP5H	O75947	161 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	KRT33A	O76009	404 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	PLAU	P00749	431 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	GAST	P01350	101 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ITGA2	P17301	1181 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	IL32	P24001	234 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	LOX	P28300	417 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	IFNA8	P32881	189 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	HMGA2	P52926	109 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	RPS4X	P62701	263 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ERVK-25	P63136	954 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ARF1	P84077	181 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	MYBPC1	Q00872	1141 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ROR2	Q01974	943 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	CHRNB3	Q05901	458 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	TOP3A	Q13472	1001 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	DAZAP2	Q15038	168 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	FAM98B	Q52LJ0	330 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ALG10	Q5BKT4	473 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ARMC4	Q5T2S8	1044 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	OTP	Q5XKR4	325 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	PGBD2	Q6P3X8	592 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	LRFN4	Q6PJG9	635 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	KLHL17	Q6TDP4	642 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	CCDC121	Q6ZUS5	278 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	OAF	Q86UD1	273 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	HS3ST5	Q8IZT8	346 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	SYT14	Q8NB59	555 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	OR9Q2	Q8NGE9	314 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	HDAC2	Q92769	488 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	PIK3IP1	Q96FE7	263 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ZNF347	Q96SE7	839 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	NELFA	Q9H3P2	528 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	MUC13	Q9H3R2	512 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	MAGIX	Q9H6Y5	334 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	CRLF2	Q9HC73	371 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	GPR35	Q9HC97	309 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	FANCF	Q9NPI8	374 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	INIP	Q9NRY2	104 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	RASSF1	Q9NS23	344 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	NPAP1	Q9NZP6	1156 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	NDRG3	Q9UGV2	375 aa		7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	ZNF346	Q9UL40	294 aa	Known RBP	7.73	□□□□□ -1.17
PRKCH-222	ENST00000556778	HIF3A	Q9Y2N7	669 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms