RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 HOXC12P31275 282 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 GSSP48637 474 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 DAP3P51398 398 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 ALG10Q5BKT4 473 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 FAM205BPQ63HN1 556 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 SMARCD3Q6STE5 483 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 AMIGO2Q86SJ2 522 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 LUZP2Q86TE4 346 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 BIVMQ86UB2 503 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 CLDN22Q8N7P3 220 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 ICA1LQ8NDH6 482 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 OR9K2Q8NGE7 335 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 OR6K3Q8NGY3 331 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 INTS12Q96CB8 462 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 FEVQ99581 238 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 RBM4BQ9BQ04 359 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 RBM4Q9BWF3 364 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 INIPQ9NRY2 104 aa15.46■□□□□ 0.07
CPSF4-209ENST00000465132 NOSIPQ9Y314 301 aaKnown RBP15.46■□□□□ 0.07
CPSF4-209ENST00000465132 FLNAP21333 2647 aaKnown RBP15.46■□□□□ 0.06
CPSF4-209ENST00000465132 IGHV3-15A0A0B4J1V0 119 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 A0A1W2PPR1 153 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF726A6NNF4 738 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 CD53P19397 219 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 SLC6A6P31641 620 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 RPL4P36578 427 aaKnown RBP15.45■□□□□ 0.06
CPSF4-209ENST00000465132 RPS4XP62701 263 aaKnown RBP15.45■□□□□ 0.06
CPSF4-209ENST00000465132 LTBQ06643 244 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 RCN1Q15293 331 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF770Q6IQ21 691 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-209ENST00000465132 PLXDC2Q6UX71 529 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 RASSF6Q6ZTQ3 369 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 ABHD12BQ7Z5M8 362 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-209ENST00000465132 CCDC103Q8IW40 242 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 CNEP1R1Q8N9A8 125 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 OR51A7Q8NH64 312 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 ABHD3Q8WU67 409 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 EME1Q96AY2 570 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 TMEM45BQ96B21 275 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 PKP2Q99959 881 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 GABARAPL1Q9H0R8 117 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 SEMA6AQ9H2E6 1030 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 VCXQ9H320 206 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 NTN4Q9HB63 628 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 BEX4Q9NWD9 120 aaPredicted RBP15.45■□□□□ 0.06
CPSF4-209ENST00000465132 VNN3Q9NY84 501 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 RCE1Q9Y256 329 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 POFUT2Q9Y2G5 429 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 VPS13CQ709C8 3753 aa15.45■□□□□ 0.06
CPSF4-209ENST00000465132 MED12LQ86YW9 2145 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 SH3D21A4FU49 640 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF716A6NP11 495 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 MCIDASD6RGH6 385 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 LRRN3E7EW58 273 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 MS4A18H0YCH9 400 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 KLF4O43474 513 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 CNOT4O95628 575 aaKnown RBP15.44■□□□□ 0.06
CPSF4-209ENST00000465132 BCL10O95999 233 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 GASTP01350 101 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 TSPAN19P0C672 248 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 ANPEPP15144 967 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 RPS6KA3P51812 740 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 POU3F1Q03052 451 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-209ENST00000465132 RPL18Q07020 188 aaKnown RBP15.44■□□□□ 0.06
CPSF4-209ENST00000465132 PPP1R8Q12972 351 aaKnown RBP15.44■□□□□ 0.06
CPSF4-209ENST00000465132 MS4A18Q3C1V0 323 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 GPR139Q6DWJ6 353 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 CREB3L2Q70SY1 520 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 KRTAP1-3Q8IUG1 177 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 ZNF100Q8IYN0 542 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 GCNT2Q8N0V5 402 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 LRRC17Q8N6Y2 441 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 OR9Q2Q8NGE9 314 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 FANK1Q8TC84 345 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 FNDC8Q8TC99 324 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 GTPBP3Q969Y2 492 aaKnown RBP15.44■□□□□ 0.06
CPSF4-209ENST00000465132 C18orf12Q96KH6 178 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 KRT84Q9NSB2 600 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 TAS2R5Q9NYW4 299 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 OAZ3Q9UMX2 235 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 PROCRQ9UNN8 238 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 BAIAP2Q9UQB8 552 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 SIGLEC7Q9Y286 467 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 CDH10Q9Y6N8 788 aa15.44■□□□□ 0.06
CPSF4-209ENST00000465132 ABCA2Q9BZC7 2435 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 A6NIZ1 184 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 A8MXE2 369 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 CENPBD1B2RD01 187 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 C11orf98E9PRG8 122 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 IDH3BO43837 385 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 APEHP13798 732 aaKnown RBP15.43■□□□□ 0.06
CPSF4-209ENST00000465132 POU2F1P14859 743 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 AGTR1P30556 359 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 AQP2P41181 271 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 P2RY4P51582 365 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 RAD23AP54725 363 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 RAP1BP61224 184 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 RAP1AP62834 184 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 RIPK1Q13546 671 aa15.43■□□□□ 0.06
CPSF4-209ENST00000465132 RFX4Q33E94 735 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms