RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 IGLV3-32A0A0A0MS00 114 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 TRDV1A0A1B0GX56 115 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 FAM171A2A8MVW0 826 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SHISA8B8ZZ34 492 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 H7C1C5 153 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 TP53I11O14683 189 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 RGS5O15539 181 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 RNF13O43567 381 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SELENOFO60613 162 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 GLCEO94923 617 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF41P51814 821 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-213ENST00000462730 LCN6P62502 163 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 ATAD3CQ5T2N8 411 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 VASNQ6EMK4 673 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 CD200R1LQ6Q8B3 271 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 EXD3Q8N9H8 876 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 TRIM63Q969Q1 353 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 KCTD7Q96MP8 289 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 BARHL1Q9BZE3 327 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF346Q9UL40 294 aaKnown RBP13.07□□□□□ -0.32
HDAC6-213ENST00000462730 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-213ENST00000462730 C21orf140B9A014 251 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 RAD1O60671 282 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 TPPPO94811 219 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 OR2T7P0C7T2 308 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 DLX5P56178 289 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 OR12D2P58182 307 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 MXD1Q05195 221 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 GPR50Q13585 617 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 SLC6A19Q695T7 634 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 LYPD4Q6UWN0 246 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 IL20RBQ6UXL0 311 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 GPALPP1Q8IXQ4 340 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 SYT14Q8NB59 555 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 OR2T27Q8NH04 317 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF417Q8TAU3 575 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 ASB15Q8WXK1 588 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 TSSK2Q96PF2 358 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF587Q96SQ5 575 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-213ENST00000462730 ALG12Q9BV10 488 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 WDR70Q9NW82 654 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 GSTK1Q9Y2Q3 226 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 N6AMT1Q9Y5N5 214 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 V9GYH0 126 aa13.06□□□□□ -0.32
HDAC6-213ENST00000462730 E9PI62 339 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 TERTO14746 1132 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OR2T1O43869 369 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OR6A2O95222 327 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 PLGP00747 810 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 RENP00797 406 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 IL1AP01583 271 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 CLEC2LP0C7M8 214 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 AHCYP23526 432 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 RORCP51449 518 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.05□□□□□ -0.323e-6■□□□□ 10.8
HDAC6-213ENST00000462730 PLPPR5Q32ZL2 321 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 LINC01590Q5TEZ4 76 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OPN5Q6U736 354 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 VASH1Q7L8A9 365 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ARIH2OSQ8N7S6 290 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OR2M3Q8NG83 312 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 HDHD5Q9BXW7 423 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 CDCP1Q9H5V8 836 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 PCDHGB7Q9Y5F8 929 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 MRPS18BQ9Y676 258 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 CHCHD2Q9Y6H1 151 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 CD8B2A6NJW9 211 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 FTCDNL1E5RQL4 147 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 GABRPO00591 440 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 PLPP3O14495 311 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 HPP00738 406 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 HLA-DPB1P04440 258 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 CD8BP10966 210 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 IL11P20809 199 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 FGF9P31371 208 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 SDC2P34741 201 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 RFX2P48378 723 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 SSR4P51571 173 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 TAS2R43P59537 309 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 GABREP78334 506 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 INPP5JQ15735 1006 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF79Q15937 498 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 TP53I3Q53FA7 332 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ARL9Q6T311 187 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 GRPEL2Q8TAA5 225 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 WDFY2Q96P53 400 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 NEDD4LQ96PU5 975 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms